Project name: a93bac51a081ff9

Status: done

Started: 2024-06-12 17:59:49
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Chain sequence(s) A: NFMLTQPHSVSESPGKTVTISCTRSSGSIASSYVQWYQQRDRFSGSIDSSSNSASLTISGLKTEDEAEYYCQSYENSNLYVVFGGGGAAAAA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:21)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:22)
Show buried residues

Minimal score value
-3.9123
Maximal score value
3.7662
Average score
-0.0754
Total score value
-6.9349

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -0.1614
2 F A 2.2048
3 M A 2.3364
4 L A 2.1384
5 T A 0.3596
6 Q A -1.2470
7 P A -1.0832
8 H A -1.1067
9 S A -0.2233
10 V A 0.7230
11 S A -0.8302
12 E A -1.8958
13 S A -1.6618
14 P A -1.4343
15 G A -1.7259
16 K A -1.8430
17 T A -0.1555
18 V A 1.6615
19 T A 1.5276
20 I A 1.9431
21 S A 0.9397
22 C A 0.6858
23 T A -0.8439
24 R A -1.9515
25 S A -0.9155
26 S A -0.8440
27 G A -0.0601
28 S A 0.6287
29 I A 1.9256
30 A A 0.9371
31 S A 0.7440
32 S A 0.9668
33 Y A 2.0282
34 V A 2.1440
35 Q A 0.8206
36 W A 1.4422
37 Y A 0.9354
38 Q A -1.1917
39 Q A -2.3795
40 R A -2.5844
61 D A -2.5084
62 R A -2.1114
63 F A 0.1655
64 S A -0.2400
65 G A -0.1526
66 S A -0.0703
67 I A 1.1437
68 D A -1.0081
69 S A -0.7540
70 S A -1.0634
71 S A -0.7740
72 N A -1.5345
73 S A -0.9063
74 A A -0.0055
75 S A 0.5344
76 L A 1.9269
77 T A 1.4342
78 I A 2.2183
79 S A 0.7521
80 G A 0.2253
81 L A 0.7365
82 K A -1.4827
83 T A -1.8115
84 E A -3.4657
85 D A -3.9123
86 E A -3.5517
87 A A -1.9331
88 E A -1.8018
89 Y A 0.5322
90 Y A 0.9580
91 C A 0.7254
92 Q A -0.1322
93 S A -0.1475
94 Y A -0.5235
95 E A -2.1686
96 N A -2.0639
97 S A -1.2241
98 N A -0.4337
99 L A 2.0731
100 Y A 3.1825
101 V A 3.7662
102 V A 3.6181
103 F A 2.7241
104 G A 1.3093
105 G A -0.6707
106 G A -0.9095
107 G A -0.5409
108 A A -0.2099
109 A A -0.1121
110 A A 0.0774
111 A A 0.1336
112 A A 0.0984
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Laboratory of Theory of Biopolymers 2018