| Chain sequence(s) |
A: NFDAAPNMPHPGDMNFDAAPNMPHDGDM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -0.6451 | |
| 2 | F | A | 0.4105 | |
| 3 | D | A | -1.3224 | |
| 4 | A | A | -0.6470 | |
| 5 | A | A | -0.4246 | |
| 6 | P | A | -0.9397 | |
| 7 | N | A | -1.2085 | |
| 8 | M | A | -0.0392 | |
| 9 | P | A | -0.9642 | |
| 10 | H | A | -1.7051 | |
| 11 | P | A | -1.1928 | |
| 12 | G | A | -1.3884 | |
| 13 | D | A | -2.2240 | |
| 14 | M | A | -0.5221 | |
| 15 | N | A | -1.1974 | |
| 16 | F | A | 0.4915 | |
| 17 | D | A | -1.6579 | |
| 18 | A | A | -1.0741 | |
| 19 | A | A | -0.4041 | |
| 20 | P | A | -0.6607 | |
| 21 | N | A | -1.3066 | |
| 22 | M | A | -0.1043 | |
| 23 | P | A | -1.0821 | |
| 24 | H | A | -2.5445 | |
| 25 | D | A | -2.7716 | |
| 26 | G | A | -2.3051 | |
| 27 | D | A | -2.1944 | |
| 28 | M | A | -0.2183 |