| Chain sequence(s) |
L: KFVSPYNTYD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 263 | K | L | -1.3429 | |
| 264 | F | L | 1.9488 | |
| 265 | V | L | 2.1147 | |
| 266 | S | L | 0.2300 | |
| 267 | P | L | -0.0253 | |
| 268 | Y | L | 1.2691 | |
| 269 | N | L | 0.0000 | |
| 270 | T | L | 0.1667 | |
| 271 | Y | L | 0.9781 | |
| 272 | D | L | -1.5510 |