| Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
C: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA B: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA input PDB |
| Selected Chain(s) | A,B,C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:13:03)
[INFO] Main: Simulation completed successfully. (00:13:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0263 | |
| 2 | D | A | 0.2003 | |
| 3 | V | A | 2.2464 | |
| 4 | F | A | 2.5418 | |
| 5 | M | A | 1.5285 | |
| 6 | K | A | -0.5474 | |
| 7 | G | A | -0.8847 | |
| 8 | L | A | 0.3521 | |
| 9 | S | A | -0.9127 | |
| 10 | K | A | -2.0338 | |
| 11 | A | A | -2.1669 | |
| 12 | K | A | -2.9773 | |
| 13 | E | A | -2.1872 | |
| 14 | G | A | -0.2985 | |
| 15 | V | A | 1.6175 | |
| 16 | V | A | 1.9735 | |
| 17 | A | A | 0.2721 | |
| 18 | A | A | -0.1845 | |
| 19 | A | A | -0.1356 | |
| 20 | E | A | -2.2610 | |
| 21 | K | A | -3.1691 | |
| 22 | T | A | -2.4563 | |
| 23 | K | A | -3.2675 | |
| 24 | Q | A | -2.6142 | |
| 25 | G | A | -1.5473 | |
| 26 | V | A | -1.1746 | |
| 27 | A | A | -1.0514 | |
| 28 | E | A | -1.9420 | |
| 29 | A | A | -1.4491 | |
| 30 | A | A | -1.2399 | |
| 31 | G | A | -1.5780 | |
| 32 | K | A | -2.6081 | |
| 33 | T | A | -2.8899 | |
| 34 | K | A | -3.6959 | |
| 35 | E | A | -2.5034 | |
| 36 | G | A | -0.5775 | |
| 37 | V | A | 1.9786 | |
| 38 | L | A | 2.8643 | |
| 39 | Y | A | 3.2233 | |
| 40 | V | A | 2.5409 | |
| 41 | G | A | 0.1166 | |
| 42 | S | A | -0.7559 | |
| 43 | K | A | -2.9288 | |
| 44 | T | A | -2.6732 | |
| 45 | K | A | -3.4056 | |
| 46 | E | A | -3.1238 | |
| 47 | G | A | -1.4577 | |
| 48 | V | A | -0.4643 | |
| 49 | V | A | 0.2538 | |
| 50 | H | A | -0.4405 | |
| 51 | G | A | 0.2439 | |
| 52 | V | A | 1.5408 | |
| 53 | A | A | 1.3139 | |
| 54 | T | A | 1.2570 | |
| 55 | V | A | 1.4053 | |
| 56 | A | A | 0.1804 | |
| 57 | E | A | -1.5513 | |
| 58 | K | A | -2.5669 | |
| 59 | T | A | -2.4859 | |
| 60 | K | A | -3.5311 | |
| 61 | E | A | -3.2546 | |
| 62 | Q | A | -2.2657 | |
| 63 | V | A | -0.3736 | |
| 64 | T | A | -0.6577 | |
| 65 | N | A | -0.8707 | |
| 66 | V | A | -0.2461 | |
| 67 | G | A | -0.5365 | |
| 68 | G | A | -0.3258 | |
| 69 | A | A | 0.6428 | |
| 70 | V | A | 1.4236 | |
| 71 | V | A | 1.0580 | |
| 72 | T | A | 0.3006 | |
| 73 | G | A | -0.0583 | |
| 74 | V | A | 0.7402 | |
| 75 | T | A | 0.3531 | |
| 76 | A | A | 0.3113 | |
| 77 | V | A | 0.4569 | |
| 78 | A | A | -0.2266 | |
| 79 | Q | A | -0.7809 | |
| 80 | K | A | -1.6732 | |
| 81 | T | A | -1.2641 | |
| 82 | V | A | -1.0949 | |
| 83 | E | A | -2.5607 | |
| 84 | G | A | -1.4276 | |
| 85 | A | A | -1.2319 | |
| 86 | G | A | -1.2162 | |
| 87 | S | A | -0.4825 | |
| 88 | I | A | 0.7391 | |
| 89 | A | A | 0.2759 | |
| 90 | A | A | 0.4524 | |
| 91 | A | A | 0.5570 | |
| 92 | T | A | 0.0000 | |
| 93 | G | A | 1.0217 | |
| 94 | F | A | 1.2662 | |
| 95 | V | A | -0.2114 | |
| 96 | K | A | -2.3813 | |
| 97 | K | A | -3.1589 | |
| 98 | D | A | -2.5253 | |
| 99 | Q | A | -1.7538 | |
| 100 | L | A | -0.4359 | |
| 101 | G | A | -1.7568 | |
| 102 | K | A | -3.2448 | |
| 103 | N | A | -3.7224 | |
| 104 | E | A | -4.2871 | |
| 105 | E | A | -3.6141 | |
| 106 | G | A | -2.0965 | |
| 107 | A | A | -1.4257 | |
| 108 | P | A | -1.8724 | |
| 109 | Q | A | -2.1015 | |
| 110 | E | A | -1.9895 | |
| 111 | G | A | -0.4904 | |
| 112 | I | A | 1.2391 | |
| 113 | L | A | 1.2407 | |
| 114 | E | A | -1.0400 | |
| 115 | D | A | -1.3302 | |
| 116 | M | A | 0.1445 | |
| 117 | P | A | -0.0062 | |
| 118 | V | A | 0.3726 | |
| 119 | D | A | -2.0707 | |
| 120 | P | A | -2.3788 | |
| 121 | D | A | -3.2287 | |
| 122 | N | A | -3.0939 | |
| 123 | E | A | -3.0160 | |
| 124 | A | A | -1.5074 | |
| 125 | Y | A | -0.1905 | |
| 126 | E | A | -0.7449 | |
| 127 | M | A | 0.2144 | |
| 128 | P | A | -0.8748 | |
| 129 | S | A | -1.6873 | |
| 130 | E | A | -2.6592 | |
| 131 | E | A | -3.0608 | |
| 132 | G | A | -1.7650 | |
| 133 | Y | A | -0.8049 | |
| 134 | Q | A | -1.9533 | |
| 135 | D | A | -2.3562 | |
| 136 | Y | A | -0.9983 | |
| 137 | E | A | -2.4976 | |
| 138 | P | A | -2.2528 | |
| 139 | E | A | -2.1835 | |
| 140 | A | A | -1.1606 | |
| 1 | M | B | 0.8911 | |
| 2 | D | B | 0.2424 | |
| 3 | V | B | 2.1088 | |
| 4 | F | B | 2.5777 | |
| 5 | M | B | 1.5538 | |
| 6 | K | B | -0.5087 | |
| 7 | G | B | -0.5990 | |
| 8 | L | B | 0.3954 | |
| 9 | S | B | -1.1959 | |
| 10 | K | B | -2.2402 | |
| 11 | A | B | -1.9304 | |
| 12 | K | B | -2.5583 | |
| 13 | E | B | -1.8535 | |
| 14 | G | B | -0.3742 | |
| 15 | V | B | 1.7060 | |
| 16 | V | B | 2.0715 | |
| 17 | A | B | 0.6109 | |
| 18 | A | B | -0.4209 | |
| 19 | A | B | -1.3751 | |
| 20 | E | B | -2.8998 | |
| 21 | K | B | -3.4280 | |
| 22 | T | B | -2.4018 | |
| 23 | K | B | -2.9690 | |
| 24 | Q | B | -2.0706 | |
| 25 | G | B | -1.3780 | |
| 26 | V | B | 0.5872 | |
| 27 | A | B | -0.4423 | |
| 28 | E | B | -1.7665 | |
| 29 | A | B | -2.0032 | |
| 30 | A | B | -1.6935 | |
| 31 | G | B | -2.0441 | |
| 32 | K | B | -2.8365 | |
| 33 | T | B | -3.5571 | |
| 34 | K | B | -4.5224 | |
| 35 | E | B | -2.9050 | |
| 36 | G | B | -0.8138 | |
| 37 | V | B | 1.4942 | |
| 38 | L | B | 3.0479 | |
| 39 | Y | B | 3.2988 | |
| 40 | V | B | 2.4970 | |
| 41 | G | B | 0.1228 | |
| 42 | S | B | 0.0000 | |
| 43 | K | B | -3.7397 | |
| 44 | T | B | -3.5448 | |
| 45 | K | B | -3.8184 | |
| 46 | E | B | -3.1817 | |
| 47 | G | B | 0.0000 | |
| 48 | V | B | 0.0000 | |
| 49 | V | B | 0.0000 | |
| 50 | H | B | -0.1560 | |
| 51 | G | B | 0.0000 | |
| 52 | V | B | 1.2114 | |
| 53 | A | B | 1.4636 | |
| 54 | T | B | 1.3115 | |
| 55 | V | B | 0.4099 | |
| 56 | A | B | -0.3611 | |
| 57 | E | B | -1.8517 | |
| 58 | K | B | -2.4440 | |
| 59 | T | B | -2.7376 | |
| 60 | K | B | -3.4985 | |
| 61 | E | B | -2.7935 | |
| 62 | Q | B | -2.0351 | |
| 63 | V | B | -0.6248 | |
| 64 | T | B | -0.6481 | |
| 65 | N | B | -0.6644 | |
| 66 | V | B | 0.0000 | |
| 67 | G | B | -0.8049 | |
| 68 | G | B | 0.0000 | |
| 69 | A | B | 0.0000 | |
| 70 | V | B | 0.0000 | |
| 71 | V | B | 0.0000 | |
| 72 | T | B | 0.2203 | |
| 73 | G | B | -0.1486 | |
| 74 | V | B | 0.0000 | |
| 75 | T | B | 0.0000 | |
| 76 | A | B | 0.0000 | |
| 77 | V | B | 0.0000 | |
| 78 | A | B | 0.0000 | |
| 79 | Q | B | 0.0000 | |
| 80 | K | B | -1.4977 | |
| 81 | T | B | -1.5949 | |
| 82 | V | B | 0.0000 | |
| 83 | E | B | -3.0159 | |
| 84 | G | B | -1.8925 | |
| 85 | A | B | -1.3087 | |
| 86 | G | B | -0.9398 | |
| 87 | S | B | 0.0000 | |
| 88 | I | B | 0.0000 | |
| 89 | A | B | 0.0000 | |
| 90 | A | B | 0.0000 | |
| 91 | A | B | 0.0000 | |
| 92 | T | B | 0.0000 | |
| 93 | G | B | 0.0000 | |
| 94 | F | B | 0.0000 | |
| 95 | V | B | 0.0000 | |
| 96 | K | B | -2.5761 | |
| 97 | K | B | -3.4680 | |
| 98 | D | B | -3.5466 | |
| 99 | Q | B | -3.1233 | |
| 100 | L | B | -1.8223 | |
| 101 | G | B | -2.2515 | |
| 102 | K | B | -3.5485 | |
| 103 | N | B | -3.7092 | |
| 104 | E | B | -3.9847 | |
| 105 | E | B | -3.8612 | |
| 106 | G | B | -2.5141 | |
| 107 | A | B | -1.4069 | |
| 108 | P | B | -1.8671 | |
| 109 | Q | B | -1.7815 | |
| 110 | E | B | -2.0136 | |
| 111 | G | B | -0.8363 | |
| 112 | I | B | 1.0989 | |
| 113 | L | B | 0.7653 | |
| 114 | E | B | -1.5235 | |
| 115 | D | B | -1.3372 | |
| 116 | M | B | 0.1881 | |
| 117 | P | B | 0.1789 | |
| 118 | V | B | 0.6404 | |
| 119 | D | B | -1.3699 | |
| 120 | P | B | -2.0799 | |
| 121 | D | B | -3.2213 | |
| 122 | N | B | -3.1642 | |
| 123 | E | B | -3.2166 | |
| 124 | A | B | -1.3168 | |
| 125 | Y | B | 0.0063 | |
| 126 | E | B | -1.5656 | |
| 127 | M | B | -0.7453 | |
| 128 | P | B | -0.9555 | |
| 129 | S | B | -1.5737 | |
| 130 | E | B | -2.5596 | |
| 131 | E | B | -2.9275 | |
| 132 | G | B | -1.6730 | |
| 133 | Y | B | -0.6081 | |
| 134 | Q | B | -1.6675 | |
| 135 | D | B | -1.9519 | |
| 136 | Y | B | -0.8224 | |
| 137 | E | B | -2.2871 | |
| 138 | P | B | -1.8593 | |
| 139 | E | B | -2.1870 | |
| 140 | A | B | -1.1708 | |
| 1 | M | C | 1.0974 | |
| 2 | D | C | 0.0897 | |
| 3 | V | C | 2.1496 | |
| 4 | F | C | 2.2950 | |
| 5 | M | C | 1.2514 | |
| 6 | K | C | -0.2668 | |
| 7 | G | C | 0.3561 | |
| 8 | L | C | 1.1559 | |
| 9 | S | C | -0.9882 | |
| 10 | K | C | -2.0447 | |
| 11 | A | C | -2.0898 | |
| 12 | K | C | -2.8651 | |
| 13 | E | C | -2.3922 | |
| 14 | G | C | -0.4758 | |
| 15 | V | C | 1.7375 | |
| 16 | V | C | 2.3281 | |
| 17 | A | C | 1.0626 | |
| 18 | A | C | -0.1331 | |
| 19 | A | C | -1.0634 | |
| 20 | E | C | -2.7830 | |
| 21 | K | C | -3.2316 | |
| 22 | T | C | -2.3944 | |
| 23 | K | C | -2.8048 | |
| 24 | Q | C | -1.9338 | |
| 25 | G | C | -1.1320 | |
| 26 | V | C | 0.3526 | |
| 27 | A | C | -0.9156 | |
| 28 | E | C | -1.8649 | |
| 29 | A | C | -1.6912 | |
| 30 | A | C | -1.4832 | |
| 31 | G | C | -1.9722 | |
| 32 | K | C | -3.4044 | |
| 33 | T | C | -3.9103 | |
| 34 | K | C | -3.8797 | |
| 35 | E | C | -2.9405 | |
| 36 | G | C | -0.6857 | |
| 37 | V | C | 1.4238 | |
| 38 | L | C | 2.7259 | |
| 39 | Y | C | 2.8077 | |
| 40 | V | C | 2.4937 | |
| 41 | G | C | -0.0305 | |
| 42 | S | C | -0.7929 | |
| 43 | K | C | -2.9894 | |
| 44 | T | C | -2.7566 | |
| 45 | K | C | -3.5204 | |
| 46 | E | C | -3.0897 | |
| 47 | G | C | -1.8193 | |
| 48 | V | C | -0.8575 | |
| 49 | V | C | 0.0000 | |
| 50 | H | C | -0.5662 | |
| 51 | G | C | 0.0000 | |
| 52 | V | C | 1.8682 | |
| 53 | A | C | 1.1292 | |
| 54 | T | C | 0.6116 | |
| 55 | V | C | 0.2992 | |
| 56 | A | C | -0.7424 | |
| 57 | E | C | -2.4309 | |
| 58 | K | C | -2.7759 | |
| 59 | T | C | -2.2207 | |
| 60 | K | C | -3.2882 | |
| 61 | E | C | -2.6080 | |
| 62 | Q | C | -1.7671 | |
| 63 | V | C | 0.4127 | |
| 64 | T | C | -0.1977 | |
| 65 | N | C | -0.9677 | |
| 66 | V | C | -0.4931 | |
| 67 | G | C | -0.7422 | |
| 68 | G | C | -0.5902 | |
| 69 | A | C | 0.2123 | |
| 70 | V | C | 0.5840 | |
| 71 | V | C | 0.6621 | |
| 72 | T | C | 0.0017 | |
| 73 | G | C | -0.3367 | |
| 74 | V | C | 0.5336 | |
| 75 | T | C | 0.2898 | |
| 76 | A | C | 0.2771 | |
| 77 | V | C | 0.5161 | |
| 78 | A | C | -0.5490 | |
| 79 | Q | C | -1.2645 | |
| 80 | K | C | -2.1105 | |
| 81 | T | C | -1.2804 | |
| 82 | V | C | -1.0098 | |
| 83 | E | C | -2.3638 | |
| 84 | G | C | -1.5270 | |
| 85 | A | C | -0.8532 | |
| 86 | G | C | -0.7961 | |
| 87 | S | C | -0.7515 | |
| 88 | I | C | 0.1569 | |
| 89 | A | C | -0.0689 | |
| 90 | A | C | 0.2531 | |
| 91 | A | C | 0.2153 | |
| 92 | T | C | 0.2470 | |
| 93 | G | C | 0.4123 | |
| 94 | F | C | 0.6413 | |
| 95 | V | C | -0.5120 | |
| 96 | K | C | -2.3746 | |
| 97 | K | C | -3.5181 | |
| 98 | D | C | -3.6371 | |
| 99 | Q | C | -2.3909 | |
| 100 | L | C | -0.2357 | |
| 101 | G | C | -1.4432 | |
| 102 | K | C | -3.1861 | |
| 103 | N | C | -3.4280 | |
| 104 | E | C | -3.9451 | |
| 105 | E | C | -3.8529 | |
| 106 | G | C | -2.3419 | |
| 107 | A | C | -1.5017 | |
| 108 | P | C | -1.9544 | |
| 109 | Q | C | -2.1162 | |
| 110 | E | C | -2.3425 | |
| 111 | G | C | -0.9290 | |
| 112 | I | C | 0.9542 | |
| 113 | L | C | 0.6971 | |
| 114 | E | C | -1.5912 | |
| 115 | D | C | -1.1216 | |
| 116 | M | C | -0.5669 | |
| 117 | P | C | -0.1486 | |
| 118 | V | C | 0.3144 | |
| 119 | D | C | -1.9534 | |
| 120 | P | C | -2.0311 | |
| 121 | D | C | -2.8299 | |
| 122 | N | C | -3.0863 | |
| 123 | E | C | -2.7168 | |
| 124 | A | C | -1.3621 | |
| 125 | Y | C | -0.2739 | |
| 126 | E | C | -1.6059 | |
| 127 | M | C | -0.3871 | |
| 128 | P | C | -0.7223 | |
| 129 | S | C | -1.5573 | |
| 130 | E | C | -2.6577 | |
| 131 | E | C | -2.8779 | |
| 132 | G | C | -1.5907 | |
| 133 | Y | C | -0.7197 | |
| 134 | Q | C | -1.7015 | |
| 135 | D | C | -1.8368 | |
| 136 | Y | C | -0.9767 | |
| 137 | E | C | -2.1115 | |
| 138 | P | C | -1.6856 | |
| 139 | E | C | -2.2227 | |
| 140 | A | C | -1.1545 |