| Chain sequence(s) |
A: DYKDDDDKLKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPNGF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:16)
[INFO] Main: Simulation completed successfully. (00:01:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.7832 | |
| 2 | Y | A | -0.8775 | |
| 3 | K | A | -3.1209 | |
| 4 | D | A | -4.2359 | |
| 5 | D | A | -4.2133 | |
| 6 | D | A | -4.2956 | |
| 7 | D | A | -4.2746 | |
| 8 | K | A | -3.4701 | |
| 9 | L | A | -2.2276 | |
| 10 | K | A | -2.1805 | |
| 11 | P | A | -0.8567 | |
| 12 | D | A | -0.6351 | |
| 13 | F | A | 0.9078 | |
| 14 | C | A | 0.0000 | |
| 15 | F | A | -0.4225 | |
| 16 | L | A | -0.1564 | |
| 17 | E | A | -2.0473 | |
| 18 | E | A | -2.2783 | |
| 19 | D | A | -1.3632 | |
| 20 | P | A | -0.5768 | |
| 21 | G | A | 0.6682 | |
| 22 | I | A | 1.9496 | |
| 23 | C | A | 0.6757 | |
| 24 | R | A | -1.2380 | |
| 25 | G | A | -0.5610 | |
| 26 | Y | A | -0.1819 | |
| 27 | I | A | 0.4209 | |
| 28 | T | A | -0.8163 | |
| 29 | R | A | -1.6095 | |
| 30 | Y | A | -2.1909 | |
| 31 | F | A | 0.0000 | |
| 32 | Y | A | 0.0000 | |
| 33 | N | A | -2.4178 | |
| 34 | N | A | -2.4100 | |
| 35 | Q | A | -2.4675 | |
| 36 | T | A | -2.1499 | |
| 37 | K | A | -2.9926 | |
| 38 | Q | A | -2.5103 | |
| 39 | C | A | 0.0000 | |
| 40 | E | A | -2.5509 | |
| 41 | R | A | -2.8142 | |
| 42 | F | A | 0.0000 | |
| 43 | K | A | -2.2060 | |
| 44 | Y | A | -0.8174 | |
| 45 | G | A | 0.0000 | |
| 46 | G | A | 0.6885 | |
| 47 | C | A | 1.6011 | |
| 48 | L | A | 2.1860 | |
| 49 | G | A | 0.7430 | |
| 50 | N | A | 0.0268 | |
| 51 | M | A | 0.6808 | |
| 52 | N | A | 0.0000 | |
| 53 | N | A | -1.2146 | |
| 54 | F | A | -1.3922 | |
| 55 | E | A | -2.2335 | |
| 56 | T | A | -2.1080 | |
| 57 | L | A | -2.1155 | |
| 58 | E | A | -2.9894 | |
| 59 | E | A | -2.6038 | |
| 60 | C | A | 0.0000 | |
| 61 | K | A | -2.2855 | |
| 62 | N | A | -1.9409 | |
| 63 | I | A | -0.7791 | |
| 64 | C | A | 0.0000 | |
| 65 | E | A | -2.4315 | |
| 66 | D | A | -1.9397 | |
| 67 | G | A | -1.6040 | |
| 68 | P | A | -1.0230 | |
| 69 | N | A | -1.6988 | |
| 70 | G | A | -0.4646 | |
| 71 | F | A | 0.7640 |