| Chain sequence(s) |
A: MTPWLGLIVLLGSWSLGDWGAEACTCSPSHPQDAFCNSDIVIRAKVVGKKLVKEGPFGTLVYTIKQMKMYRGFTKMPHVQYIHTEASESLCGLKLEVNKYQYLLTGRVYDGKMYTGLCNFVERWDQLTLSQRKGLNYRYHLGCNCKIKSCYYLPCFVTSKNECLWTDMLSNFGYPGYQSKHYACIRQKGGYCSWYRGWAPPDKSIINATDP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:59)
[INFO] Main: Simulation completed successfully. (00:03:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0407 | |
| 2 | T | A | 0.0723 | |
| 3 | P | A | -0.0514 | |
| 4 | W | A | 1.4248 | |
| 5 | L | A | 1.6805 | |
| 6 | G | A | 0.0995 | |
| 7 | L | A | 1.8278 | |
| 8 | I | A | 2.6188 | |
| 9 | V | A | 2.4278 | |
| 10 | L | A | 2.1591 | |
| 11 | L | A | 1.7452 | |
| 12 | G | A | -0.2181 | |
| 13 | S | A | -0.0787 | |
| 14 | W | A | 1.1073 | |
| 15 | S | A | 0.3000 | |
| 16 | L | A | 1.4208 | |
| 17 | G | A | -0.5111 | |
| 18 | D | A | -1.7014 | |
| 19 | W | A | 0.7639 | |
| 20 | G | A | -0.4198 | |
| 21 | A | A | -0.3613 | |
| 22 | E | A | -1.7983 | |
| 23 | A | A | -0.2609 | |
| 24 | C | A | 0.1517 | |
| 25 | T | A | 0.0078 | |
| 26 | C | A | 0.2324 | |
| 27 | S | A | -0.1735 | |
| 28 | P | A | -0.1303 | |
| 29 | S | A | -0.1061 | |
| 30 | H | A | 0.0000 | |
| 31 | P | A | 0.0000 | |
| 32 | Q | A | 0.0000 | |
| 33 | D | A | -0.5463 | |
| 34 | A | A | -0.0950 | |
| 35 | F | A | 0.0000 | |
| 36 | C | A | -0.1906 | |
| 37 | N | A | -1.2561 | |
| 38 | S | A | 0.0000 | |
| 39 | D | A | -0.3366 | |
| 40 | I | A | 0.0000 | |
| 41 | V | A | 0.0000 | |
| 42 | I | A | 0.0000 | |
| 43 | R | A | -0.4588 | |
| 44 | A | A | 0.0000 | |
| 45 | K | A | -0.6205 | |
| 46 | V | A | 0.0000 | |
| 47 | V | A | 0.3409 | |
| 48 | G | A | -0.3309 | |
| 49 | K | A | -2.0250 | |
| 50 | K | A | -1.8867 | |
| 51 | L | A | 0.4338 | |
| 52 | V | A | 0.2400 | |
| 53 | K | A | -1.9541 | |
| 54 | E | A | -2.2137 | |
| 55 | G | A | -0.8397 | |
| 56 | P | A | 0.0087 | |
| 57 | F | A | 1.8954 | |
| 58 | G | A | 0.0000 | |
| 59 | T | A | -0.0903 | |
| 60 | L | A | 0.0000 | |
| 61 | V | A | 0.1700 | |
| 62 | Y | A | 0.0000 | |
| 63 | T | A | 0.0775 | |
| 64 | I | A | 0.0000 | |
| 65 | K | A | -1.7561 | |
| 66 | Q | A | -0.5202 | |
| 67 | M | A | 0.2583 | |
| 68 | K | A | -1.1397 | |
| 69 | M | A | 0.0000 | |
| 70 | Y | A | 0.0152 | |
| 71 | R | A | -0.6002 | |
| 72 | G | A | 0.1882 | |
| 73 | F | A | 1.8875 | |
| 74 | T | A | -0.0285 | |
| 75 | K | A | -1.6904 | |
| 76 | M | A | -0.2286 | |
| 77 | P | A | -0.1151 | |
| 78 | H | A | -1.0319 | |
| 79 | V | A | 0.0000 | |
| 80 | Q | A | -1.0350 | |
| 81 | Y | A | 0.6797 | |
| 82 | I | A | 0.0000 | |
| 83 | H | A | 0.0000 | |
| 84 | T | A | 0.0000 | |
| 85 | E | A | -0.7045 | |
| 86 | A | A | -0.1288 | |
| 87 | S | A | -0.3690 | |
| 88 | E | A | -1.8218 | |
| 89 | S | A | -0.2834 | |
| 90 | L | A | 0.5086 | |
| 91 | C | A | 0.1290 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | K | A | -1.7000 | |
| 95 | L | A | 0.0000 | |
| 96 | E | A | -0.9068 | |
| 97 | V | A | 0.3544 | |
| 98 | N | A | -1.4373 | |
| 99 | K | A | -1.8862 | |
| 100 | Y | A | -0.1325 | |
| 101 | Q | A | -0.3106 | |
| 102 | Y | A | 0.0000 | |
| 103 | L | A | 0.0000 | |
| 104 | L | A | 0.0000 | |
| 105 | T | A | 0.0000 | |
| 106 | G | A | 0.0000 | |
| 107 | R | A | -0.7827 | |
| 108 | V | A | 0.3086 | |
| 109 | Y | A | 0.9578 | |
| 110 | D | A | -1.6472 | |
| 111 | G | A | -0.9463 | |
| 112 | K | A | -0.9690 | |
| 113 | M | A | 0.0000 | |
| 114 | Y | A | 0.5069 | |
| 115 | T | A | 0.0000 | |
| 116 | G | A | 0.0000 | |
| 117 | L | A | 0.7600 | |
| 118 | C | A | 0.5925 | |
| 119 | N | A | -0.2628 | |
| 120 | F | A | 0.2104 | |
| 121 | V | A | 0.2476 | |
| 122 | E | A | -0.4637 | |
| 123 | R | A | -0.5127 | |
| 124 | W | A | -0.2813 | |
| 125 | D | A | -1.9798 | |
| 126 | Q | A | -1.5168 | |
| 127 | L | A | 0.0000 | |
| 128 | T | A | 0.0823 | |
| 129 | L | A | 0.5348 | |
| 130 | S | A | 0.0000 | |
| 131 | Q | A | 0.0000 | |
| 132 | R | A | -0.8208 | |
| 133 | K | A | -1.5915 | |
| 134 | G | A | 0.0000 | |
| 135 | L | A | 0.0000 | |
| 136 | N | A | -1.0337 | |
| 137 | Y | A | 1.0837 | |
| 138 | R | A | 0.0000 | |
| 139 | Y | A | 0.0000 | |
| 140 | H | A | -0.8985 | |
| 141 | L | A | 0.3360 | |
| 142 | G | A | 0.0000 | |
| 143 | C | A | 0.0631 | |
| 144 | N | A | -1.2076 | |
| 145 | C | A | -0.4642 | |
| 146 | K | A | -1.6493 | |
| 147 | I | A | -0.1857 | |
| 148 | K | A | -0.3749 | |
| 149 | S | A | -0.1520 | |
| 150 | C | A | 0.0000 | |
| 151 | Y | A | 1.3389 | |
| 152 | Y | A | 1.7956 | |
| 153 | L | A | 1.7159 | |
| 154 | P | A | 0.2026 | |
| 155 | C | A | 0.4507 | |
| 156 | F | A | 2.2088 | |
| 157 | V | A | 1.6559 | |
| 158 | T | A | 0.1483 | |
| 159 | S | A | -0.4222 | |
| 160 | K | A | -1.7103 | |
| 161 | N | A | -0.8228 | |
| 162 | E | A | 0.0000 | |
| 163 | C | A | 0.0000 | |
| 164 | L | A | 0.2216 | |
| 165 | W | A | 0.0000 | |
| 166 | T | A | -0.0139 | |
| 167 | D | A | 0.0000 | |
| 168 | M | A | 0.2192 | |
| 169 | L | A | 0.1948 | |
| 170 | S | A | -0.4071 | |
| 171 | N | A | -1.0550 | |
| 172 | F | A | 1.1565 | |
| 173 | G | A | 0.2019 | |
| 174 | Y | A | 1.1247 | |
| 175 | P | A | 0.1762 | |
| 176 | G | A | 0.0000 | |
| 177 | Y | A | 1.2860 | |
| 178 | Q | A | 0.1030 | |
| 179 | S | A | 0.0000 | |
| 180 | K | A | -0.6352 | |
| 181 | H | A | -0.2899 | |
| 182 | Y | A | 0.0392 | |
| 183 | A | A | 0.0000 | |
| 184 | C | A | 0.0000 | |
| 185 | I | A | -0.1009 | |
| 186 | R | A | -1.6741 | |
| 187 | Q | A | -0.9730 | |
| 188 | K | A | -1.8497 | |
| 189 | G | A | -0.8036 | |
| 190 | G | A | -0.1247 | |
| 191 | Y | A | 0.5342 | |
| 192 | C | A | 0.0000 | |
| 193 | S | A | -0.0088 | |
| 194 | W | A | 0.3412 | |
| 195 | Y | A | 0.5276 | |
| 196 | R | A | -1.0956 | |
| 197 | G | A | -0.0772 | |
| 198 | W | A | 1.1772 | |
| 199 | A | A | 0.2111 | |
| 200 | P | A | -0.2141 | |
| 201 | P | A | -0.5904 | |
| 202 | D | A | -2.1374 | |
| 203 | K | A | -2.0616 | |
| 204 | S | A | -0.1438 | |
| 205 | I | A | 2.3446 | |
| 206 | I | A | 2.1414 | |
| 207 | N | A | -0.8674 | |
| 208 | A | A | -0.1748 | |
| 209 | T | A | -0.3995 | |
| 210 | D | A | -1.8433 | |
| 211 | P | A | -0.5792 |