| Chain sequence(s) |
D: VHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVVPENFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH
input PDB |
| Selected Chain(s) | D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with D chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:16)
[INFO] Main: Simulation completed successfully. (00:03:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 2 | V | D | 0.5831 | |
| 3 | H | D | -0.6978 | |
| 4 | L | D | 0.0000 | |
| 5 | T | D | -1.3295 | |
| 6 | P | D | -1.6823 | |
| 7 | E | D | -2.4221 | |
| 8 | E | D | -1.9474 | |
| 9 | K | D | -1.8315 | |
| 10 | S | D | -1.4144 | |
| 11 | A | D | -1.0105 | |
| 12 | V | D | 0.0000 | |
| 13 | T | D | -0.6316 | |
| 14 | A | D | -0.6270 | |
| 15 | L | D | 0.0000 | |
| 16 | W | D | -0.5743 | |
| 17 | G | D | -1.1878 | |
| 18 | K | D | -1.8754 | |
| 19 | V | D | 0.0000 | |
| 20 | N | D | -1.8387 | |
| 21 | V | D | -0.6584 | |
| 22 | D | D | -2.4930 | |
| 23 | E | D | -2.8177 | |
| 24 | V | D | 0.0000 | |
| 25 | G | D | 0.0000 | |
| 26 | G | D | 0.0000 | |
| 27 | E | D | -1.9274 | |
| 28 | A | D | 0.0000 | |
| 29 | L | D | 0.0000 | |
| 30 | G | D | 0.0000 | |
| 31 | R | D | -0.8051 | |
| 32 | L | D | 0.0000 | |
| 33 | L | D | 0.0000 | |
| 34 | V | D | 0.1093 | |
| 35 | V | D | 0.8471 | |
| 36 | Y | D | 0.6891 | |
| 37 | P | D | -0.0010 | |
| 38 | W | D | 0.2082 | |
| 39 | T | D | 0.0000 | |
| 40 | Q | D | -1.1035 | |
| 41 | R | D | -1.9254 | |
| 42 | F | D | -0.5492 | |
| 43 | F | D | -1.3116 | |
| 44 | E | D | -2.4922 | |
| 45 | S | D | -1.5308 | |
| 46 | F | D | -1.3861 | |
| 47 | G | D | -1.9794 | |
| 48 | D | D | -2.6974 | |
| 49 | L | D | 0.0000 | |
| 50 | S | D | -1.1261 | |
| 51 | T | D | -1.0929 | |
| 52 | P | D | -1.1549 | |
| 53 | D | D | -2.1575 | |
| 54 | A | D | -1.6297 | |
| 55 | V | D | 0.0000 | |
| 56 | M | D | -1.2845 | |
| 57 | G | D | -1.5447 | |
| 58 | N | D | 0.0000 | |
| 59 | P | D | -1.3299 | |
| 60 | K | D | -1.8456 | |
| 61 | V | D | 0.0000 | |
| 62 | K | D | -2.3345 | |
| 63 | A | D | -1.9462 | |
| 64 | H | D | -1.6014 | |
| 65 | G | D | 0.0000 | |
| 66 | K | D | -2.4180 | |
| 67 | K | D | -2.1210 | |
| 68 | V | D | -0.7811 | |
| 69 | L | D | 0.0000 | |
| 70 | G | D | -1.1651 | |
| 71 | A | D | -0.9243 | |
| 72 | F | D | 0.0000 | |
| 73 | S | D | -0.7539 | |
| 74 | D | D | -1.6030 | |
| 75 | G | D | 0.0000 | |
| 76 | L | D | -0.8477 | |
| 77 | A | D | -0.9786 | |
| 78 | H | D | -1.9717 | |
| 79 | L | D | -1.5866 | |
| 80 | D | D | -2.5341 | |
| 81 | N | D | -2.7188 | |
| 82 | L | D | 0.0000 | |
| 83 | K | D | -2.4629 | |
| 84 | G | D | -1.8056 | |
| 85 | T | D | -1.4404 | |
| 86 | F | D | 0.0000 | |
| 87 | A | D | -1.0867 | |
| 88 | T | D | -0.6243 | |
| 89 | L | D | -0.6184 | |
| 90 | S | D | 0.0000 | |
| 91 | E | D | -2.8983 | |
| 92 | L | D | -1.4557 | |
| 93 | H | D | -1.1740 | |
| 94 | C | D | 0.0000 | |
| 95 | D | D | -3.3931 | |
| 96 | K | D | -2.6919 | |
| 97 | L | D | -0.8856 | |
| 98 | H | D | -1.2522 | |
| 99 | V | D | -0.2529 | |
| 100 | V | D | 0.5290 | |
| 101 | P | D | -0.8576 | |
| 102 | E | D | -1.9348 | |
| 103 | N | D | 0.0000 | |
| 104 | F | D | 0.0000 | |
| 105 | R | D | -2.4542 | |
| 106 | L | D | -1.1191 | |
| 107 | L | D | -0.8191 | |
| 108 | G | D | 0.0000 | |
| 109 | N | D | -1.2002 | |
| 110 | V | D | 0.0000 | |
| 111 | L | D | 0.0000 | |
| 112 | V | D | 0.0000 | |
| 113 | C | D | -0.2458 | |
| 114 | V | D | 0.0000 | |
| 115 | L | D | 0.0000 | |
| 116 | A | D | -1.2928 | |
| 117 | H | D | -1.5546 | |
| 118 | H | D | -1.9131 | |
| 119 | F | D | -1.9292 | |
| 120 | G | D | -2.3116 | |
| 121 | K | D | -2.9940 | |
| 122 | E | D | -2.8890 | |
| 123 | F | D | 0.0000 | |
| 124 | T | D | -1.3746 | |
| 125 | P | D | -0.9376 | |
| 126 | P | D | -0.7415 | |
| 127 | V | D | -1.0090 | |
| 128 | Q | D | -1.0106 | |
| 129 | A | D | -0.6846 | |
| 130 | A | D | 0.0000 | |
| 131 | Y | D | 0.0000 | |
| 132 | Q | D | -1.2126 | |
| 133 | K | D | -0.7345 | |
| 134 | V | D | 0.0000 | |
| 135 | V | D | 0.0000 | |
| 136 | A | D | -0.7949 | |
| 137 | G | D | -0.4842 | |
| 138 | V | D | 0.0000 | |
| 139 | A | D | 0.0000 | |
| 140 | N | D | -1.5669 | |
| 141 | A | D | 0.0000 | |
| 142 | L | D | -1.1906 | |
| 143 | A | D | 0.0000 | |
| 144 | H | D | -2.4266 | |
| 145 | K | D | -2.8453 | |
| 146 | Y | D | -1.5664 | |
| 147 | H | D | -1.6275 |