| Chain sequence(s) |
A: LAVFIN
C: LAVFIN B: LAVFIN E: LAVFIN D: LAVFIN G: LAVFIN F: LAVFIN I: LAVFIN H: LAVFIN J: LAVFIN input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,J |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 3 | L | C | 1.4940 | |
| 4 | A | C | 1.7529 | |
| 5 | V | C | 0.0000 | |
| 6 | F | C | 1.5206 | |
| 7 | I | C | 0.0000 | |
| 8 | N | C | -1.4048 | |
| 3 | L | A | 2.0345 | |
| 4 | A | A | 1.9295 | |
| 5 | V | A | 2.9250 | |
| 6 | F | A | 2.1978 | |
| 7 | I | A | 1.3070 | |
| 8 | N | A | -0.8610 | |
| 3 | L | B | 1.7839 | |
| 4 | A | B | 1.7805 | |
| 5 | V | B | 2.6191 | |
| 6 | F | B | 2.3191 | |
| 7 | I | B | 1.1796 | |
| 8 | N | B | -0.8309 | |
| 3 | L | E | 1.2521 | |
| 4 | A | E | 1.0847 | |
| 5 | V | E | 0.0000 | |
| 6 | F | E | 0.8658 | |
| 7 | I | E | 0.0000 | |
| 8 | N | E | -1.9736 | |
| 3 | L | D | 1.3334 | |
| 4 | A | D | 1.6068 | |
| 5 | V | D | 0.0000 | |
| 6 | F | D | 1.4753 | |
| 7 | I | D | 0.0000 | |
| 8 | N | D | -1.3941 | |
| 3 | L | F | 1.2233 | |
| 4 | A | F | 1.0579 | |
| 5 | V | F | 0.0000 | |
| 6 | F | F | 0.8898 | |
| 7 | I | F | 0.0000 | |
| 8 | N | F | -1.6173 | |
| 3 | L | G | 1.3348 | |
| 4 | A | G | 1.5316 | |
| 5 | V | G | 0.0000 | |
| 6 | F | G | 1.2795 | |
| 7 | I | G | 0.0000 | |
| 8 | N | G | -1.6238 | |
| 3 | L | H | 1.3957 | |
| 4 | A | H | 1.5760 | |
| 5 | V | H | 0.0000 | |
| 6 | F | H | 1.2754 | |
| 7 | I | H | 0.0000 | |
| 8 | N | H | -1.3324 | |
| 3 | L | I | 1.6682 | |
| 4 | A | I | 1.6264 | |
| 5 | V | I | 0.0000 | |
| 6 | F | I | 1.9277 | |
| 7 | I | I | 0.0000 | |
| 8 | N | I | -1.0513 | |
| 3 | L | J | 1.8678 | |
| 4 | A | J | 1.7478 | |
| 5 | V | J | 2.3579 | |
| 6 | F | J | 2.1918 | |
| 7 | I | J | 0.9464 | |
| 8 | N | J | -0.9102 |