| Chain sequence(s) |
A: TFLCLA
C: TFLCLA B: TFLCLA E: TFLCLA D: TFLCLA G: TFLCLA F: TFLCLA I: TFLCLA H: TFLCLA J: TFLCLA input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,J |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | C | 0.8257 | |
| 2 | F | C | 1.6869 | |
| 3 | L | C | 0.0000 | |
| 4 | C | C | 1.3198 | |
| 5 | L | C | 1.0767 | |
| 6 | A | C | 0.4964 | |
| 1 | T | E | 0.4728 | |
| 2 | F | E | 1.3810 | |
| 3 | L | E | 0.0000 | |
| 4 | C | E | 0.7432 | |
| 5 | L | E | 0.0000 | |
| 6 | A | E | 0.2248 | |
| 1 | T | D | 0.7731 | |
| 2 | F | D | 1.5133 | |
| 3 | L | D | 0.0000 | |
| 4 | C | D | 1.0710 | |
| 5 | L | D | 0.0000 | |
| 6 | A | D | 0.3388 | |
| 1 | T | A | 1.1174 | |
| 2 | F | A | 2.5800 | |
| 3 | L | A | 2.0862 | |
| 4 | C | A | 1.8939 | |
| 5 | L | A | 1.5204 | |
| 6 | A | A | 0.5857 | |
| 1 | T | B | 1.0359 | |
| 2 | F | B | 2.4169 | |
| 3 | L | B | 0.0000 | |
| 4 | C | B | 1.5722 | |
| 5 | L | B | 1.2014 | |
| 6 | A | B | 0.3950 | |
| 1 | T | F | 0.3326 | |
| 2 | F | F | 1.1971 | |
| 3 | L | F | 0.0000 | |
| 4 | C | F | 0.6032 | |
| 5 | L | F | 0.0000 | |
| 6 | A | F | 0.1773 | |
| 1 | T | I | 1.0404 | |
| 2 | F | I | 2.3550 | |
| 3 | L | I | 1.8626 | |
| 4 | C | I | 1.2325 | |
| 5 | L | I | 1.2340 | |
| 6 | A | I | 0.3807 | |
| 1 | T | H | 0.8330 | |
| 2 | F | H | 1.6918 | |
| 3 | L | H | 0.0000 | |
| 4 | C | H | 1.4707 | |
| 5 | L | H | 0.0000 | |
| 6 | A | H | 0.5806 | |
| 1 | T | J | 1.1779 | |
| 2 | F | J | 2.7699 | |
| 3 | L | J | 2.4231 | |
| 4 | C | J | 2.0150 | |
| 5 | L | J | 2.2279 | |
| 6 | A | J | 0.8714 | |
| 1 | T | G | 0.9448 | |
| 2 | F | G | 1.8962 | |
| 3 | L | G | 0.0000 | |
| 4 | C | G | 1.0800 | |
| 5 | L | G | 0.0000 | |
| 6 | A | G | 0.3132 |