| Chain sequence(s) |
A: DVQLQASGGGLVQAGGSLRLSCAASSGTFSSYTMGWFRQAPGKERELVARLSQSLTTLYADSVKGRFTISRDNAENTVYLQMNSLKPEDTGVYYCAAHPGTYGSAWLISPHDYAYWGQGTQVTVS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:01)
[INFO] Main: Simulation completed successfully. (00:01:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.9130 | |
| 2 | V | A | -1.0440 | |
| 3 | Q | A | -1.6819 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.7088 | |
| 6 | A | A | -1.1906 | |
| 7 | S | A | -1.1973 | |
| 8 | G | A | -1.1267 | |
| 9 | G | A | -0.7853 | |
| 10 | G | A | 0.0322 | |
| 11 | L | A | 1.1121 | |
| 12 | V | A | 0.0650 | |
| 13 | Q | A | -1.2233 | |
| 14 | A | A | -1.4978 | |
| 15 | G | A | -1.3941 | |
| 16 | G | A | -0.9221 | |
| 17 | S | A | -1.2333 | |
| 18 | L | A | -0.9992 | |
| 19 | R | A | -2.0903 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8481 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.1254 | |
| 24 | A | A | -1.1684 | |
| 25 | S | A | -1.1301 | |
| 26 | S | A | -0.8712 | |
| 27 | G | A | -1.0085 | |
| 28 | T | A | -0.5369 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.1800 | |
| 31 | S | A | -0.8546 | |
| 32 | Y | A | -0.5090 | |
| 33 | T | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | -1.7793 | |
| 39 | Q | A | -2.4389 | |
| 40 | A | A | -2.2380 | |
| 41 | P | A | -1.6135 | |
| 42 | G | A | -1.9415 | |
| 43 | K | A | -3.4670 | |
| 44 | E | A | -3.7465 | |
| 45 | R | A | -3.1591 | |
| 46 | E | A | -2.9657 | |
| 47 | L | A | -1.0406 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | R | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | Q | A | -0.9085 | |
| 54 | S | A | -0.0522 | |
| 55 | L | A | 1.0078 | |
| 56 | T | A | 0.6536 | |
| 57 | T | A | 0.4629 | |
| 58 | L | A | 0.4382 | |
| 59 | Y | A | -0.5678 | |
| 60 | A | A | -1.4196 | |
| 61 | D | A | -2.4054 | |
| 62 | S | A | -1.8455 | |
| 63 | V | A | 0.0000 | |
| 64 | K | A | -2.5508 | |
| 65 | G | A | -1.7699 | |
| 66 | R | A | -1.5176 | |
| 67 | F | A | 0.0000 | |
| 68 | T | A | -0.7770 | |
| 69 | I | A | 0.0000 | |
| 70 | S | A | -0.3084 | |
| 71 | R | A | -1.1567 | |
| 72 | D | A | -2.0256 | |
| 73 | N | A | -2.4566 | |
| 74 | A | A | -1.8343 | |
| 75 | E | A | -2.6118 | |
| 76 | N | A | -2.0164 | |
| 77 | T | A | 0.0000 | |
| 78 | V | A | 0.0000 | |
| 79 | Y | A | -0.6333 | |
| 80 | L | A | 0.0000 | |
| 81 | Q | A | -1.2095 | |
| 82 | M | A | 0.0000 | |
| 83 | N | A | -1.4411 | |
| 84 | S | A | -1.2802 | |
| 85 | L | A | 0.0000 | |
| 86 | K | A | -2.5771 | |
| 87 | P | A | -2.0348 | |
| 88 | E | A | -2.4736 | |
| 89 | D | A | 0.0000 | |
| 90 | T | A | -1.0519 | |
| 91 | G | A | 0.0000 | |
| 92 | V | A | -0.7412 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | -0.7588 | |
| 95 | C | A | 0.0000 | |
| 96 | A | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | H | A | -0.3945 | |
| 99 | P | A | -0.3258 | |
| 100 | G | A | -0.3573 | |
| 101 | T | A | 0.3033 | |
| 102 | Y | A | 0.9553 | |
| 103 | G | A | 0.4387 | |
| 104 | S | A | 0.8891 | |
| 105 | A | A | 1.0676 | |
| 106 | W | A | 1.9284 | |
| 107 | L | A | 2.0114 | |
| 108 | I | A | 0.7907 | |
| 109 | S | A | -0.0893 | |
| 110 | P | A | -1.0757 | |
| 111 | H | A | -1.4907 | |
| 112 | D | A | -1.2013 | |
| 113 | Y | A | 0.0000 | |
| 114 | A | A | -0.1099 | |
| 115 | Y | A | 0.1242 | |
| 116 | W | A | 0.0156 | |
| 117 | G | A | -0.9031 | |
| 118 | Q | A | -1.5070 | |
| 119 | G | A | -1.0806 | |
| 120 | T | A | -1.1441 | |
| 121 | Q | A | -1.0950 | |
| 122 | V | A | 0.0000 | |
| 123 | T | A | -0.3056 | |
| 124 | V | A | 0.0000 | |
| 125 | S | A | -0.7867 |