Project name: query_structure

Status: done

Started: 2026-03-16 23:04:07
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Chain sequence(s) A: DVQLQASGGGLVQAGGSLRLSCAASSGTFSSYTMGWFRQAPGKERELVARLSQSLTTLYADSVKGRFTISRDNAENTVYLQMNSLKPEDTGVYYCAAHPGTYGSAWLISPHDYAYWGQGTQVTVS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:02)
Show buried residues

Minimal score value
-3.7465
Maximal score value
2.0114
Average score
-0.749
Total score value
-93.6261

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -1.9130
2 V A -1.0440
3 Q A -1.6819
4 L A 0.0000
5 Q A -1.7088
6 A A -1.1906
7 S A -1.1973
8 G A -1.1267
9 G A -0.7853
10 G A 0.0322
11 L A 1.1121
12 V A 0.0650
13 Q A -1.2233
14 A A -1.4978
15 G A -1.3941
16 G A -0.9221
17 S A -1.2333
18 L A -0.9992
19 R A -2.0903
20 L A 0.0000
21 S A -0.8481
22 C A 0.0000
23 A A -1.1254
24 A A -1.1684
25 S A -1.1301
26 S A -0.8712
27 G A -1.0085
28 T A -0.5369
29 F A 0.0000
30 S A -1.1800
31 S A -0.8546
32 Y A -0.5090
33 T A 0.0000
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 F A 0.0000
38 R A -1.7793
39 Q A -2.4389
40 A A -2.2380
41 P A -1.6135
42 G A -1.9415
43 K A -3.4670
44 E A -3.7465
45 R A -3.1591
46 E A -2.9657
47 L A -1.0406
48 V A 0.0000
49 A A 0.0000
50 R A 0.0000
51 L A 0.0000
52 S A 0.0000
53 Q A -0.9085
54 S A -0.0522
55 L A 1.0078
56 T A 0.6536
57 T A 0.4629
58 L A 0.4382
59 Y A -0.5678
60 A A -1.4196
61 D A -2.4054
62 S A -1.8455
63 V A 0.0000
64 K A -2.5508
65 G A -1.7699
66 R A -1.5176
67 F A 0.0000
68 T A -0.7770
69 I A 0.0000
70 S A -0.3084
71 R A -1.1567
72 D A -2.0256
73 N A -2.4566
74 A A -1.8343
75 E A -2.6118
76 N A -2.0164
77 T A 0.0000
78 V A 0.0000
79 Y A -0.6333
80 L A 0.0000
81 Q A -1.2095
82 M A 0.0000
83 N A -1.4411
84 S A -1.2802
85 L A 0.0000
86 K A -2.5771
87 P A -2.0348
88 E A -2.4736
89 D A 0.0000
90 T A -1.0519
91 G A 0.0000
92 V A -0.7412
93 Y A 0.0000
94 Y A -0.7588
95 C A 0.0000
96 A A 0.0000
97 A A 0.0000
98 H A -0.3945
99 P A -0.3258
100 G A -0.3573
101 T A 0.3033
102 Y A 0.9553
103 G A 0.4387
104 S A 0.8891
105 A A 1.0676
106 W A 1.9284
107 L A 2.0114
108 I A 0.7907
109 S A -0.0893
110 P A -1.0757
111 H A -1.4907
112 D A -1.2013
113 Y A 0.0000
114 A A -0.1099
115 Y A 0.1242
116 W A 0.0156
117 G A -0.9031
118 Q A -1.5070
119 G A -1.0806
120 T A -1.1441
121 Q A -1.0950
122 V A 0.0000
123 T A -0.3056
124 V A 0.0000
125 S A -0.7867
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Laboratory of Theory of Biopolymers 2018