| Chain sequence(s) |
A: AVAQSFNMQQQRRFYEALHDPNLNEEQRNAKIKSIRDD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:42)
[INFO] Main: Simulation completed successfully. (00:00:43)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.6074 | |
| 2 | V | A | 1.5017 | |
| 3 | A | A | 0.2061 | |
| 4 | Q | A | -0.7448 | |
| 5 | S | A | -0.3398 | |
| 6 | F | A | 0.6204 | |
| 7 | N | A | -0.9770 | |
| 8 | M | A | 0.0961 | |
| 9 | Q | A | -1.0818 | |
| 10 | Q | A | -1.7061 | |
| 11 | Q | A | -2.0846 | |
| 12 | R | A | -2.8164 | |
| 13 | R | A | -2.6436 | |
| 14 | F | A | -1.8585 | |
| 15 | Y | A | -0.7185 | |
| 16 | E | A | -2.1201 | |
| 17 | A | A | 0.0000 | |
| 18 | L | A | -0.2133 | |
| 19 | H | A | -1.0172 | |
| 20 | D | A | -1.5359 | |
| 21 | P | A | -1.7704 | |
| 22 | N | A | -2.1384 | |
| 23 | L | A | -2.3487 | |
| 24 | N | A | -3.0403 | |
| 25 | E | A | -3.8138 | |
| 26 | E | A | -3.8632 | |
| 27 | Q | A | -3.0401 | |
| 28 | R | A | -3.2185 | |
| 29 | N | A | -3.1775 | |
| 30 | A | A | -2.5929 | |
| 31 | K | A | -2.8223 | |
| 32 | I | A | -2.5354 | |
| 33 | K | A | -3.4596 | |
| 34 | S | A | -2.7356 | |
| 35 | I | A | 0.0000 | |
| 36 | R | A | -3.6730 | |
| 37 | D | A | -3.5647 | |
| 38 | D | A | -2.2695 |