Project name: GGGHKFF4

Status: done

Started: 2026-02-23 06:44:54
Settings
Chain sequence(s) A: GGGHKFF
C: GGGHKFF
B: GGGHKFF
D: GGGHKFF
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:53)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:54)
Show buried residues

Minimal score value
-1.6931
Maximal score value
2.1188
Average score
-0.4753
Total score value
-13.3096

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -1.2818
2 G A -1.5532
3 G A -1.4397
4 H A -1.2280
5 K A -0.9358
6 F A 0.7457
7 F A 1.8593
1 G B -0.9027
2 G B -1.5360
3 G B -1.4801
4 H B -1.0133
5 K B -1.1226
6 F B 0.8114
7 F B 2.1188
1 G C -1.0706
2 G C -1.4237
3 G C -0.6242
4 H C -0.0842
5 K C -1.0593
6 F C 0.3023
7 F C 1.7485
1 G D -1.5007
2 G D -1.6931
3 G D -1.4911
4 H D -0.8768
5 K D -0.7705
6 F D 0.4758
7 F D 1.7160
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Laboratory of Theory of Biopolymers 2018