| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVDGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTAPVHETADVRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGVPLPAAAPPSPLYVPPPPSSPTAVPPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPENNVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:03)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9466 | |
| 2 | L | A | 1.9730 | |
| 3 | P | A | 0.6512 | |
| 4 | P | A | 0.3499 | |
| 5 | T | A | 0.1128 | |
| 6 | T | A | 0.1363 | |
| 7 | P | A | 0.1515 | |
| 8 | V | A | 1.2298 | |
| 9 | A | A | 0.0796 | |
| 10 | K | A | -1.0108 | |
| 11 | V | A | -0.1474 | |
| 12 | Q | A | -1.3578 | |
| 13 | S | A | -1.5147 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3322 | |
| 16 | E | A | -2.3939 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4787 | |
| 20 | P | A | 0.1194 | |
| 21 | T | A | 0.1096 | |
| 22 | S | A | -0.1716 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1059 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3049 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8989 | |
| 31 | R | A | -2.6790 | |
| 32 | L | A | -0.7965 | |
| 33 | L | A | 1.1603 | |
| 34 | T | A | 1.5413 | |
| 35 | V | A | 1.8132 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2114 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6379 | |
| 40 | K | A | -1.6908 | |
| 41 | D | A | -0.6890 | |
| 42 | I | A | 1.3684 | |
| 43 | V | A | 2.2519 | |
| 44 | V | A | 1.7205 | |
| 45 | D | A | -0.9030 | |
| 46 | G | A | -0.5079 | |
| 47 | K | A | -0.1482 | |
| 48 | V | A | 2.0701 | |
| 49 | V | A | 2.7288 | |
| 50 | V | A | 1.5897 | |
| 51 | P | A | 0.3581 | |
| 52 | K | A | -0.6753 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1593 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3920 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2686 | |
| 70 | K | A | -1.7911 | |
| 71 | F | A | -0.6444 | |
| 72 | A | A | -0.5747 | |
| 73 | L | A | -0.8770 | |
| 74 | P | A | -1.2840 | |
| 75 | Q | A | -2.4947 | |
| 76 | K | A | -3.1014 | |
| 77 | D | A | -2.9864 | |
| 78 | F | A | -1.6648 | |
| 79 | Y | A | -1.8801 | |
| 80 | D | A | -2.6838 | |
| 81 | P | A | -2.3031 | |
| 82 | E | A | -3.0430 | |
| 83 | K | A | -3.3887 | |
| 84 | E | A | -2.4489 | |
| 85 | R | A | -1.2824 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6271 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9617 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3383 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6880 | |
| 99 | G | A | -0.5410 | |
| 100 | P | A | -0.4059 | |
| 101 | L | A | 0.0409 | |
| 102 | G | A | -0.1777 | |
| 103 | K | A | -0.5535 | |
| 104 | G | A | -0.4139 | |
| 105 | T | A | -0.4463 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1375 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4241 | |
| 110 | L | A | 0.3971 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0138 | |
| 113 | K | A | -0.4099 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2487 | |
| 117 | T | A | -0.8836 | |
| 118 | E | A | -1.8765 | |
| 119 | N | A | -2.0098 | |
| 120 | P | A | -1.3417 | |
| 121 | T | A | -0.6682 | |
| 122 | A | A | -0.3306 | |
| 123 | P | A | -0.4551 | |
| 124 | V | A | -0.3061 | |
| 125 | H | A | -1.4100 | |
| 126 | E | A | -2.1394 | |
| 127 | T | A | -1.5196 | |
| 128 | A | A | -1.2173 | |
| 129 | D | A | -2.0430 | |
| 130 | V | A | -1.3619 | |
| 131 | R | A | -0.7573 | |
| 132 | V | A | 0.3949 | |
| 133 | A | A | 0.4435 | |
| 134 | F | A | 0.2764 | |
| 135 | S | A | -0.0842 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5641 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5321 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2324 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1474 | |
| 157 | D | A | 0.3128 | |
| 158 | L | A | 0.7694 | |
| 159 | A | A | 0.1415 | |
| 160 | E | A | -1.4668 | |
| 161 | P | A | -0.2210 | |
| 162 | C | A | 0.1909 | |
| 163 | P | A | -0.1700 | |
| 164 | G | A | -0.0806 | |
| 165 | L | A | 0.5832 | |
| 166 | P | A | -0.1223 | |
| 167 | P | A | -0.3429 | |
| 168 | G | A | -0.4560 | |
| 169 | A | A | 0.2945 | |
| 170 | C | A | 1.0065 | |
| 171 | P | A | 0.5019 | |
| 172 | P | A | 0.8035 | |
| 173 | I | A | 1.9099 | |
| 174 | Q | A | 0.8048 | |
| 175 | L | A | 1.4756 | |
| 176 | V | A | 0.8541 | |
| 177 | N | A | -0.3461 | |
| 178 | S | A | -0.1343 | |
| 179 | V | A | 0.3377 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3589 | |
| 182 | D | A | 0.0626 | |
| 183 | G | A | -0.1580 | |
| 184 | D | A | -0.5400 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1050 | |
| 190 | F | A | 0.0569 | |
| 191 | G | A | -0.1092 | |
| 192 | N | A | -0.2577 | |
| 193 | M | A | -0.1203 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3949 | |
| 197 | E | A | -2.6041 | |
| 198 | L | A | -1.2406 | |
| 199 | Q | A | -2.5574 | |
| 200 | Q | A | -3.3066 | |
| 201 | D | A | -3.5540 | |
| 202 | R | A | -3.3217 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2167 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3484 | |
| 211 | S | A | -1.8820 | |
| 212 | T | A | -1.4172 | |
| 213 | R | A | -2.0463 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1533 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2846 | |
| 220 | L | A | 0.4659 | |
| 221 | K | A | -1.3869 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9032 | |
| 224 | N | A | -1.5893 | |
| 225 | E | A | -1.3030 | |
| 226 | A | A | -0.6050 | |
| 227 | Y | A | -0.3693 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6855 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0740 | |
| 234 | F | A | 0.2668 | |
| 235 | G | A | -0.8272 | |
| 236 | R | A | -2.6128 | |
| 237 | R | A | -2.8904 | |
| 238 | E | A | -2.1093 | |
| 239 | Q | A | -0.1919 | |
| 240 | V | A | 1.3858 | |
| 241 | Y | A | 1.0754 | |
| 242 | A | A | 0.1223 | |
| 243 | R | A | -1.1534 | |
| 244 | H | A | -1.0839 | |
| 245 | F | A | -0.0699 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6197 | |
| 249 | A | A | -1.2616 | |
| 250 | G | A | -1.0885 | |
| 251 | P | A | -0.6267 | |
| 252 | E | A | -0.3964 | |
| 253 | G | A | 0.0715 | |
| 254 | V | A | 1.3186 | |
| 255 | P | A | 0.3547 | |
| 256 | L | A | 1.0051 | |
| 257 | P | A | 0.4965 | |
| 258 | A | A | 0.5731 | |
| 259 | A | A | 0.7052 | |
| 260 | A | A | 0.1124 | |
| 261 | P | A | 0.1490 | |
| 262 | P | A | 0.1049 | |
| 263 | S | A | 0.6487 | |
| 264 | P | A | 0.7177 | |
| 265 | L | A | 1.8957 | |
| 266 | Y | A | 1.7827 | |
| 267 | V | A | 2.0088 | |
| 268 | P | A | 1.0685 | |
| 269 | P | A | 0.3724 | |
| 270 | P | A | -0.3406 | |
| 271 | P | A | -0.3162 | |
| 272 | S | A | -0.3300 | |
| 273 | S | A | -0.1913 | |
| 274 | P | A | -0.2388 | |
| 275 | T | A | 0.2036 | |
| 276 | A | A | 0.4973 | |
| 277 | V | A | 1.6044 | |
| 278 | P | A | 0.7357 | |
| 279 | P | A | -0.2577 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.1170 | |
| 282 | D | A | -0.6473 | |
| 283 | Y | A | 0.7973 | |
| 284 | F | A | 0.6657 | |
| 285 | G | A | 0.1852 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8579 | |
| 291 | L | A | 1.6084 | |
| 292 | V | A | 0.6347 | |
| 293 | S | A | -0.1703 | |
| 294 | S | A | -0.9657 | |
| 295 | D | A | -1.8440 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1141 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6057 | |
| 301 | R | A | -1.8324 | |
| 302 | P | A | -0.9334 | |
| 303 | F | A | -0.1718 | |
| 304 | W | A | -0.5418 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0750 | |
| 307 | R | A | -2.8224 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2726 | |
| 310 | G | A | -1.2279 | |
| 311 | N | A | -1.2512 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7941 | |
| 319 | N | A | -0.8541 | |
| 320 | E | A | -1.0333 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3268 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0483 | |
| 333 | N | A | 0.6177 | |
| 334 | F | A | 1.7912 | |
| 335 | T | A | 0.9557 | |
| 336 | I | A | 0.5074 | |
| 337 | S | A | -1.0856 | |
| 338 | Q | A | -2.0208 | |
| 339 | Q | A | -1.9437 | |
| 340 | L | A | -0.1250 | |
| 341 | S | A | -0.4663 | |
| 342 | T | A | -1.0423 | |
| 343 | P | A | -1.5022 | |
| 344 | E | A | -2.5716 | |
| 345 | N | A | -2.0078 | |
| 346 | N | A | -1.3148 | |
| 347 | V | A | 0.8063 | |
| 348 | Y | A | 1.1384 | |
| 349 | D | A | -0.2914 | |
| 350 | P | A | -1.0070 | |
| 351 | S | A | -0.7466 | |
| 352 | N | A | -0.8320 | |
| 353 | F | A | -1.3893 | |
| 354 | K | A | -2.2230 | |
| 355 | N | A | -1.7828 | |
| 356 | Y | A | 0.0965 | |
| 357 | L | A | 0.7859 | |
| 358 | R | A | 1.0576 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3833 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0733 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0254 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6831 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3017 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3099 | |
| 376 | L | A | -1.7080 | |
| 377 | D | A | -1.9807 | |
| 378 | P | A | -1.0335 | |
| 379 | G | A | -1.0085 | |
| 380 | V | A | -0.9266 | |
| 381 | L | A | -0.5273 | |
| 382 | A | A | -0.6481 | |
| 383 | H | A | -0.7982 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3870 | |
| 386 | T | A | -0.5381 | |
| 387 | M | A | -0.3472 | |
| 388 | N | A | -0.8537 | |
| 389 | P | A | -1.2266 | |
| 390 | T | A | -1.4003 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3759 | |
| 393 | E | A | -2.6959 | |
| 394 | N | A | -2.4334 | |
| 395 | W | A | -1.2703 | |
| 396 | N | A | -0.9508 | |
| 397 | L | A | -0.1316 | |
| 398 | G | A | 0.5952 | |
| 399 | F | A | 2.4372 | |
| 400 | V | A | 1.8513 | |
| 401 | P | A | 0.0687 | |
| 402 | P | A | -1.7450 | |
| 403 | K | A | -3.2943 | |
| 404 | E | A | -3.8009 | |
| 405 | R | A | -3.7988 | |
| 406 | E | A | -3.7347 | |
| 407 | D | A | -2.8575 | |
| 408 | P | A | -1.7510 | |
| 409 | Y | A | -0.9919 | |
| 410 | K | A | -2.1097 | |
| 411 | G | A | -0.6367 | |
| 412 | L | A | 0.6623 | |
| 413 | I | A | 1.5748 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4013 | |
| 416 | E | A | -1.7068 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9633 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0736 | |
| 421 | E | A | -2.8084 | |
| 422 | R | A | -2.6160 | |
| 423 | F | A | -1.3033 | |
| 424 | S | A | -1.4837 | |
| 425 | Q | A | -1.8004 | |
| 426 | D | A | -2.9053 | |
| 427 | L | A | -1.9836 | |
| 428 | D | A | -2.7704 | |
| 429 | Q | A | -2.6124 | |
| 430 | F | A | -1.3992 | |
| 431 | A | A | -0.8719 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5239 | |
| 435 | K | A | -0.6721 | |
| 436 | F | A | 0.1810 | |
| 437 | L | A | 1.0512 | |
| 438 | Y | A | 0.8475 | |
| 439 | Q | A | -0.2635 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine