Project name: FKFEKGH12

Status: done

Started: 2026-02-13 11:55:19
Settings
Chain sequence(s) A: FKFEKGH
C: FKFEKGH
B: FKFEKGH
E: FKFEKGH
D: FKFEKGH
G: FKFEKGH
F: FKFEKGH
I: FKFEKGH
H: FKFEKGH
K: FKFEKGH
J: FKFEKGH
L: FKFEKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:45)
Show buried residues

Minimal score value
-4.0388
Maximal score value
0.0165
Average score
-2.2182
Total score value
-186.3272

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 0.0000
2 K A -2.2103
3 F A -2.2630
4 E A -3.9184
5 K A -3.9375
6 G A -2.9325
7 H A -1.9656
1 F B -0.4270
2 K B -2.1031
3 F B -2.2832
4 E B -3.8631
5 K B -4.0388
6 G B -2.9614
7 H B -2.2255
1 F C -0.2962
2 K C -2.2542
3 F C -2.0562
4 E C -3.3389
5 K C -3.9362
6 G C -2.9472
7 H C -2.0022
1 F D -0.1357
2 K D -1.5936
3 F D -1.4682
4 E D -3.5053
5 K D -3.5902
6 G D -2.5704
7 H D -1.9727
1 F E -0.2487
2 K E -1.6776
3 F E -1.7173
4 E E -2.9693
5 K E -3.4518
6 G E -2.5740
7 H E -1.7624
1 F F 0.0000
2 K F -1.8964
3 F F -1.9963
4 E F -3.2268
5 K F -3.6011
6 G F -2.8416
7 H F -1.8392
1 F G -0.4509
2 K G -1.9851
3 F G -1.9630
4 E G -3.3829
5 K G -3.7420
6 G G -2.7406
7 H G -1.9059
1 F H -0.2582
2 K H -1.6584
3 F H -1.7081
4 E H -3.1595
5 K H -3.6726
6 G H -2.7948
7 H H -2.1596
1 F I -0.0260
2 K I -1.5882
3 F I -1.6775
4 E I -2.9887
5 K I -3.7114
6 G I -2.8526
7 H I -1.9851
1 F J 0.0165
2 K J -1.4359
3 F J -1.6070
4 E J -3.1160
5 K J -3.5545
6 G J -2.6276
7 H J -1.9021
1 F K -0.1587
2 K K -1.5731
3 F K -1.5539
4 E K -3.1741
5 K K -3.4718
6 G K -2.4713
7 H K -1.9187
1 F L -0.3042
2 K L -1.6291
3 F L -1.7129
4 E L -3.1059
5 K L -3.5190
6 G L -2.6913
7 H L -1.8064
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Laboratory of Theory of Biopolymers 2018