| Chain sequence(s) |
A: FKFEKGH
C: FKFEKGH B: FKFEKGH E: FKFEKGH D: FKFEKGH G: FKFEKGH F: FKFEKGH I: FKFEKGH H: FKFEKGH K: FKFEKGH J: FKFEKGH L: FKFEKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:43)
[INFO] Main: Simulation completed successfully. (00:07:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.0000 | |
| 2 | K | A | -2.2103 | |
| 3 | F | A | -2.2630 | |
| 4 | E | A | -3.9184 | |
| 5 | K | A | -3.9375 | |
| 6 | G | A | -2.9325 | |
| 7 | H | A | -1.9656 | |
| 1 | F | B | -0.4270 | |
| 2 | K | B | -2.1031 | |
| 3 | F | B | -2.2832 | |
| 4 | E | B | -3.8631 | |
| 5 | K | B | -4.0388 | |
| 6 | G | B | -2.9614 | |
| 7 | H | B | -2.2255 | |
| 1 | F | C | -0.2962 | |
| 2 | K | C | -2.2542 | |
| 3 | F | C | -2.0562 | |
| 4 | E | C | -3.3389 | |
| 5 | K | C | -3.9362 | |
| 6 | G | C | -2.9472 | |
| 7 | H | C | -2.0022 | |
| 1 | F | D | -0.1357 | |
| 2 | K | D | -1.5936 | |
| 3 | F | D | -1.4682 | |
| 4 | E | D | -3.5053 | |
| 5 | K | D | -3.5902 | |
| 6 | G | D | -2.5704 | |
| 7 | H | D | -1.9727 | |
| 1 | F | E | -0.2487 | |
| 2 | K | E | -1.6776 | |
| 3 | F | E | -1.7173 | |
| 4 | E | E | -2.9693 | |
| 5 | K | E | -3.4518 | |
| 6 | G | E | -2.5740 | |
| 7 | H | E | -1.7624 | |
| 1 | F | F | 0.0000 | |
| 2 | K | F | -1.8964 | |
| 3 | F | F | -1.9963 | |
| 4 | E | F | -3.2268 | |
| 5 | K | F | -3.6011 | |
| 6 | G | F | -2.8416 | |
| 7 | H | F | -1.8392 | |
| 1 | F | G | -0.4509 | |
| 2 | K | G | -1.9851 | |
| 3 | F | G | -1.9630 | |
| 4 | E | G | -3.3829 | |
| 5 | K | G | -3.7420 | |
| 6 | G | G | -2.7406 | |
| 7 | H | G | -1.9059 | |
| 1 | F | H | -0.2582 | |
| 2 | K | H | -1.6584 | |
| 3 | F | H | -1.7081 | |
| 4 | E | H | -3.1595 | |
| 5 | K | H | -3.6726 | |
| 6 | G | H | -2.7948 | |
| 7 | H | H | -2.1596 | |
| 1 | F | I | -0.0260 | |
| 2 | K | I | -1.5882 | |
| 3 | F | I | -1.6775 | |
| 4 | E | I | -2.9887 | |
| 5 | K | I | -3.7114 | |
| 6 | G | I | -2.8526 | |
| 7 | H | I | -1.9851 | |
| 1 | F | J | 0.0165 | |
| 2 | K | J | -1.4359 | |
| 3 | F | J | -1.6070 | |
| 4 | E | J | -3.1160 | |
| 5 | K | J | -3.5545 | |
| 6 | G | J | -2.6276 | |
| 7 | H | J | -1.9021 | |
| 1 | F | K | -0.1587 | |
| 2 | K | K | -1.5731 | |
| 3 | F | K | -1.5539 | |
| 4 | E | K | -3.1741 | |
| 5 | K | K | -3.4718 | |
| 6 | G | K | -2.4713 | |
| 7 | H | K | -1.9187 | |
| 1 | F | L | -0.3042 | |
| 2 | K | L | -1.6291 | |
| 3 | F | L | -1.7129 | |
| 4 | E | L | -3.1059 | |
| 5 | K | L | -3.5190 | |
| 6 | G | L | -2.6913 | |
| 7 | H | L | -1.8064 |