| Chain sequence(s) |
A: LVVLVAAGELEEALALVEAALALGVEEVVVEAAEVEALEALAAAGVEAVELAAGEAEELAALLEAAAALGAEEVVVAAGELEVLELALELGAVALVVAAGEVEEALALVAALEELGAEEVVVAVEEAEALEALLAAGAEAVLVAAGEAEEALALVALAEAGGAEEVVVEVEELELLEALAAA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:56)
[INFO] Main: Simulation completed successfully. (00:01:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.1689 | |
| 2 | V | A | 0.0008 | |
| 3 | V | A | 0.0000 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.0000 | |
| 6 | A | A | -1.6538 | |
| 7 | A | A | -2.5382 | |
| 8 | G | A | -2.2706 | |
| 9 | E | A | -3.0509 | |
| 10 | L | A | -2.4032 | |
| 11 | E | A | -3.1065 | |
| 12 | E | A | -3.7930 | |
| 13 | A | A | 0.0000 | |
| 14 | L | A | -1.5221 | |
| 15 | A | A | -1.5788 | |
| 16 | L | A | 0.0000 | |
| 17 | V | A | 0.0000 | |
| 18 | E | A | -1.2816 | |
| 19 | A | A | -0.2897 | |
| 20 | A | A | 0.0000 | |
| 21 | L | A | 0.6588 | |
| 22 | A | A | 0.5671 | |
| 23 | L | A | 0.2904 | |
| 24 | G | A | -0.2147 | |
| 25 | V | A | -0.2889 | |
| 26 | E | A | -1.5529 | |
| 27 | E | A | -1.2190 | |
| 28 | V | A | 0.0000 | |
| 29 | V | A | 0.0000 | |
| 30 | V | A | 0.0000 | |
| 31 | E | A | -0.8573 | |
| 32 | A | A | 0.0000 | |
| 33 | A | A | -1.4275 | |
| 34 | E | A | -2.6339 | |
| 35 | V | A | -2.0371 | |
| 36 | E | A | -2.7085 | |
| 37 | A | A | -2.2783 | |
| 38 | L | A | 0.0000 | |
| 39 | E | A | -2.3308 | |
| 40 | A | A | -1.3148 | |
| 41 | L | A | 0.0000 | |
| 42 | A | A | -1.0833 | |
| 43 | A | A | -0.5529 | |
| 44 | A | A | -0.6926 | |
| 45 | G | A | -0.9641 | |
| 46 | V | A | 0.0000 | |
| 47 | E | A | -2.2172 | |
| 48 | A | A | 0.0000 | |
| 49 | V | A | 0.0000 | |
| 50 | E | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | A | A | -0.8698 | |
| 53 | A | A | -1.7603 | |
| 54 | G | A | -2.2144 | |
| 55 | E | A | -3.5015 | |
| 56 | A | A | -2.6055 | |
| 57 | E | A | -3.2232 | |
| 58 | E | A | -3.4512 | |
| 59 | L | A | 0.0000 | |
| 60 | A | A | -1.6577 | |
| 61 | A | A | -1.7452 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | E | A | -1.6243 | |
| 65 | A | A | -1.3296 | |
| 66 | A | A | 0.0000 | |
| 67 | A | A | -0.9190 | |
| 68 | A | A | -0.4608 | |
| 69 | L | A | -0.5519 | |
| 70 | G | A | -1.2196 | |
| 71 | A | A | -1.6731 | |
| 72 | E | A | -2.5589 | |
| 73 | E | A | -1.9222 | |
| 74 | V | A | 0.0000 | |
| 75 | V | A | 0.0000 | |
| 76 | V | A | 0.0000 | |
| 77 | A | A | -0.3867 | |
| 78 | A | A | -1.1535 | |
| 79 | G | A | -1.7231 | |
| 80 | E | A | -2.6009 | |
| 81 | L | A | -1.5060 | |
| 82 | E | A | -2.5512 | |
| 83 | V | A | 0.0000 | |
| 84 | L | A | 0.0000 | |
| 85 | E | A | -1.4839 | |
| 86 | L | A | -1.0611 | |
| 87 | A | A | 0.0000 | |
| 88 | L | A | -0.7712 | |
| 89 | E | A | -1.4328 | |
| 90 | L | A | -0.5162 | |
| 91 | G | A | -0.6613 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.0234 | |
| 94 | A | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | V | A | 0.0000 | |
| 97 | V | A | 0.0000 | |
| 98 | A | A | -0.9559 | |
| 99 | A | A | -1.6454 | |
| 100 | G | A | -2.0141 | |
| 101 | E | A | -2.9793 | |
| 102 | V | A | -2.2669 | |
| 103 | E | A | -3.0600 | |
| 104 | E | A | -3.1741 | |
| 105 | A | A | 0.0000 | |
| 106 | L | A | -0.9911 | |
| 107 | A | A | -1.0146 | |
| 108 | L | A | -0.9203 | |
| 109 | V | A | -0.6478 | |
| 110 | A | A | -0.8578 | |
| 111 | A | A | -0.7610 | |
| 112 | L | A | 0.0000 | |
| 113 | E | A | -2.9424 | |
| 114 | E | A | -2.4446 | |
| 115 | L | A | -1.1251 | |
| 116 | G | A | -1.7729 | |
| 117 | A | A | -1.9912 | |
| 118 | E | A | -2.6121 | |
| 119 | E | A | -2.1568 | |
| 120 | V | A | 0.0000 | |
| 121 | V | A | 0.0000 | |
| 122 | V | A | 0.0000 | |
| 123 | A | A | -0.6387 | |
| 124 | V | A | 0.0000 | |
| 125 | E | A | -3.2096 | |
| 126 | E | A | -3.7366 | |
| 127 | A | A | -2.7909 | |
| 128 | E | A | -3.1974 | |
| 129 | A | A | 0.0000 | |
| 130 | L | A | 0.0000 | |
| 131 | E | A | -2.6606 | |
| 132 | A | A | -1.5248 | |
| 133 | L | A | 0.0000 | |
| 134 | L | A | -1.3796 | |
| 135 | A | A | -0.7444 | |
| 136 | A | A | -0.6373 | |
| 137 | G | A | -0.9809 | |
| 138 | A | A | -1.2967 | |
| 139 | E | A | -2.3824 | |
| 140 | A | A | 0.0000 | |
| 141 | V | A | 0.0000 | |
| 142 | L | A | 0.0000 | |
| 143 | V | A | 0.0000 | |
| 144 | A | A | -1.7375 | |
| 145 | A | A | -2.4623 | |
| 146 | G | A | -2.5678 | |
| 147 | E | A | -3.2060 | |
| 148 | A | A | -2.9076 | |
| 149 | E | A | -3.0437 | |
| 150 | E | A | -3.5651 | |
| 151 | A | A | 0.0000 | |
| 152 | L | A | -0.8276 | |
| 153 | A | A | -0.7461 | |
| 154 | L | A | 0.0000 | |
| 155 | V | A | 0.0000 | |
| 156 | A | A | -0.4792 | |
| 157 | L | A | -0.5938 | |
| 158 | A | A | 0.0000 | |
| 159 | E | A | -2.2339 | |
| 160 | A | A | -1.2300 | |
| 161 | G | A | -1.8278 | |
| 162 | G | A | -2.0348 | |
| 163 | A | A | -2.4201 | |
| 164 | E | A | -2.8475 | |
| 165 | E | A | -1.7421 | |
| 166 | V | A | 0.0000 | |
| 167 | V | A | 0.2337 | |
| 168 | V | A | 0.0000 | |
| 169 | E | A | -1.1574 | |
| 170 | V | A | 0.0000 | |
| 171 | E | A | -3.2156 | |
| 172 | E | A | -3.4937 | |
| 173 | L | A | -1.9509 | |
| 174 | E | A | -2.9887 | |
| 175 | L | A | 0.0000 | |
| 176 | L | A | 0.0000 | |
| 177 | E | A | -2.2315 | |
| 178 | A | A | -1.5046 | |
| 179 | L | A | -0.4395 | |
| 180 | A | A | -0.5176 | |
| 181 | A | A | -0.2441 | |
| 182 | A | A | -0.0255 |