Project name: Sirius_1

Status: done

Started: 2025-02-17 09:50:55
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Chain sequence(s) A: NKDEAGGNWKQFKGKVKEQWGKLTDDDITIIEGKRDQLVGKIQERYGYQKDQAEKEVVDWETRNEYRWMEGTFTSDVSSYLEGQAAKEFIAWLVRGRG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:38)
Show buried residues

Minimal score value
-4.0356
Maximal score value
0.8337
Average score
-1.6128
Total score value
-158.0503

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -3.2324
2 K A -3.9078
3 D A -3.9930
4 E A -3.8646
5 A A 0.0000
6 G A -2.6646
7 G A -2.5570
8 N A -2.2527
9 W A 0.0000
10 K A -2.6009
11 Q A -2.5196
12 F A 0.0000
13 K A 0.0000
14 G A -2.3247
15 K A -2.3832
16 V A 0.0000
17 K A -2.8995
18 E A -3.0443
19 Q A -2.1048
20 W A 0.0000
21 G A -2.1838
22 K A -2.1251
23 L A 0.0000
24 T A -1.0080
25 D A -0.6433
26 D A -0.0221
27 D A 0.0000
28 I A 0.0000
29 T A 0.0000
30 I A 0.0600
31 I A 0.0000
32 E A -2.3334
33 G A -2.2502
34 K A -3.4310
35 R A -3.3699
36 D A -3.5715
37 Q A -2.7205
38 L A 0.0000
39 V A 0.0000
40 G A -2.4273
41 K A -1.9819
42 I A 0.0000
43 Q A -2.8201
44 E A -2.8258
45 R A -2.0018
46 Y A -1.0657
47 G A -1.6172
48 Y A -2.0427
49 Q A -3.2751
50 K A -4.0247
51 D A -4.0356
52 Q A -3.2934
53 A A 0.0000
54 E A -3.5591
55 K A -3.2363
56 E A -2.0720
57 V A 0.0000
58 V A -0.9508
59 D A -1.5207
60 W A 0.0000
61 E A -1.9863
62 T A -2.1722
63 R A -2.9137
64 N A -2.4788
65 E A -2.9930
66 Y A -1.9749
67 R A -2.6280
68 W A -0.5499
69 M A 0.0000
70 E A -2.1222
71 G A -1.3549
72 T A -0.8896
73 F A 0.0000
74 T A -1.6902
75 S A -1.2509
76 D A -2.1309
77 V A 0.0000
78 S A -1.6317
79 S A -1.4737
80 Y A -2.3098
81 L A 0.0000
82 E A -3.1005
83 G A -2.3294
84 Q A -2.5376
85 A A -1.6495
86 A A 0.0000
87 K A -2.7426
88 E A -2.1860
89 F A 0.1059
90 I A 0.0353
91 A A -0.0474
92 W A 0.5511
93 L A 0.3802
94 V A 0.8337
95 R A -1.1461
96 G A -1.2095
97 R A -2.0896
98 G A -1.6695
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Laboratory of Theory of Biopolymers 2018