| Chain sequence(s) |
A: MKAILVFALIAISIISVNAGMMTGGSVEQDASQKEYSDKAWKAVKGINDQASNNGPYYYAPIKVTKASTQVVAGISTKLEVLVGESNCKKGELQAHEITSSNCQIKDGGSRALYQVTIWEKPWENFEQFTVEKIRDVTADEQF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:50)
[INFO] Main: Simulation completed successfully. (00:01:51)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4749 | |
| 2 | K | A | -0.3849 | |
| 3 | A | A | 1.0394 | |
| 4 | I | A | 3.0914 | |
| 5 | L | A | 3.6768 | |
| 6 | V | A | 4.1692 | |
| 7 | F | A | 4.1534 | |
| 8 | A | A | 2.9623 | |
| 9 | L | A | 3.5914 | |
| 10 | I | A | 3.5643 | |
| 11 | A | A | 2.6436 | |
| 12 | I | A | 3.4396 | |
| 13 | S | A | 2.4495 | |
| 14 | I | A | 3.5583 | |
| 15 | I | A | 3.3993 | |
| 16 | S | A | 1.6646 | |
| 17 | V | A | 1.8112 | |
| 18 | N | A | -0.1812 | |
| 19 | A | A | 0.2621 | |
| 20 | G | A | 0.1893 | |
| 21 | M | A | 1.1654 | |
| 22 | M | A | 1.3392 | |
| 23 | T | A | 0.8053 | |
| 24 | G | A | 0.9896 | |
| 25 | G | A | 0.5074 | |
| 26 | S | A | -0.1373 | |
| 27 | V | A | -0.3176 | |
| 28 | E | A | -2.6946 | |
| 29 | Q | A | -2.6916 | |
| 30 | D | A | -3.1707 | |
| 31 | A | A | -2.8352 | |
| 32 | S | A | -2.2450 | |
| 33 | Q | A | -2.9575 | |
| 34 | K | A | -3.6700 | |
| 35 | E | A | -3.5636 | |
| 36 | Y | A | -3.1295 | |
| 37 | S | A | -2.5420 | |
| 38 | D | A | -3.2834 | |
| 39 | K | A | -2.0962 | |
| 40 | A | A | 0.0000 | |
| 41 | W | A | -1.2938 | |
| 42 | K | A | -1.7936 | |
| 43 | A | A | 0.0000 | |
| 44 | V | A | 0.0000 | |
| 45 | K | A | -2.0757 | |
| 46 | G | A | -1.7358 | |
| 47 | I | A | 0.0000 | |
| 48 | N | A | 0.0000 | |
| 49 | D | A | -2.8923 | |
| 50 | Q | A | -2.4545 | |
| 51 | A | A | -1.4433 | |
| 52 | S | A | -1.5647 | |
| 53 | N | A | 0.0000 | |
| 54 | N | A | -1.7014 | |
| 55 | G | A | -1.0396 | |
| 56 | P | A | -1.1594 | |
| 57 | Y | A | -1.3346 | |
| 58 | Y | A | 0.0000 | |
| 59 | Y | A | -0.3642 | |
| 60 | A | A | 0.0000 | |
| 61 | P | A | -0.2011 | |
| 62 | I | A | 0.3880 | |
| 63 | K | A | -0.5956 | |
| 64 | V | A | 0.0000 | |
| 65 | T | A | -1.0591 | |
| 66 | K | A | -2.7671 | |
| 67 | A | A | 0.0000 | |
| 68 | S | A | -1.9610 | |
| 69 | T | A | -0.2740 | |
| 70 | Q | A | 0.4644 | |
| 71 | V | A | 2.1471 | |
| 72 | V | A | 1.7796 | |
| 73 | A | A | 0.9591 | |
| 74 | G | A | 0.0000 | |
| 75 | I | A | 0.9783 | |
| 76 | S | A | 0.0000 | |
| 77 | T | A | 0.0000 | |
| 78 | K | A | -1.4274 | |
| 79 | L | A | 0.0000 | |
| 80 | E | A | -1.7007 | |
| 81 | V | A | 0.0000 | |
| 82 | L | A | 0.0000 | |
| 83 | V | A | 0.0000 | |
| 84 | G | A | 0.0000 | |
| 85 | E | A | -1.0399 | |
| 86 | S | A | 0.0000 | |
| 87 | N | A | -1.8944 | |
| 88 | C | A | 0.0000 | |
| 89 | K | A | -2.4480 | |
| 90 | K | A | -2.1776 | |
| 91 | G | A | -2.0260 | |
| 92 | E | A | -2.7875 | |
| 93 | L | A | -2.3348 | |
| 94 | Q | A | -2.9353 | |
| 95 | A | A | 0.0000 | |
| 96 | H | A | -2.7173 | |
| 97 | E | A | -2.9317 | |
| 98 | I | A | 0.0000 | |
| 99 | T | A | -1.2544 | |
| 100 | S | A | -0.6825 | |
| 101 | S | A | -0.8231 | |
| 102 | N | A | -1.2609 | |
| 103 | C | A | 0.0000 | |
| 104 | Q | A | -1.4386 | |
| 105 | I | A | -0.7901 | |
| 106 | K | A | -2.0237 | |
| 107 | D | A | -2.5055 | |
| 108 | G | A | -1.5883 | |
| 109 | G | A | -1.2927 | |
| 110 | S | A | -1.0689 | |
| 111 | R | A | -1.0221 | |
| 112 | A | A | 0.0000 | |
| 113 | L | A | 0.0000 | |
| 114 | Y | A | 0.0000 | |
| 115 | Q | A | -1.5645 | |
| 116 | V | A | 0.0000 | |
| 117 | T | A | -0.6790 | |
| 118 | I | A | 0.0000 | |
| 119 | W | A | -0.1804 | |
| 120 | E | A | -0.7971 | |
| 121 | K | A | -0.9201 | |
| 122 | P | A | -0.8737 | |
| 123 | W | A | -0.0982 | |
| 124 | E | A | -1.8646 | |
| 125 | N | A | -1.9337 | |
| 126 | F | A | -1.3748 | |
| 127 | E | A | -2.2385 | |
| 128 | Q | A | -1.1950 | |
| 129 | F | A | -0.5608 | |
| 130 | T | A | -0.5123 | |
| 131 | V | A | -1.2512 | |
| 132 | E | A | -2.4795 | |
| 133 | K | A | -2.2519 | |
| 134 | I | A | -0.8201 | |
| 135 | R | A | -1.8419 | |
| 136 | D | A | -2.2979 | |
| 137 | V | A | 0.0000 | |
| 138 | T | A | -1.5875 | |
| 139 | A | A | -1.7980 | |
| 140 | D | A | -2.3496 | |
| 141 | E | A | -1.7130 | |
| 142 | Q | A | -1.2505 | |
| 143 | F | A | 0.4198 |