Project name: RVAC_29_03_2026 [mutate: YN5A] [mutate: TS16A, TS18A] [mutate: ST53A, VL54A] [mutate: YN55A] [mutate: YN72A] [mutate: LV102A] [mutate: VA102A] [mutate: IL108A] [mutate: LV108A] [mutate: TS109A] [mutate: YN111A] [mutate: LV141A] [mutate: GA142A] [mutate: IL143A] [mutate: GA144A] [mutate: CS145A] [mutate: LV146A] [mutate: TS147A]

Status: done

Started: 2026-03-31 13:27:27
Settings
Chain sequence(s) A: MDTPNANSTQEEPFLSSSLCLYYPTEAATEINDTEWKDTLSQLFLTKGWPTGTLNFKEYTDIASFSVDPQLNCDYNIVLMKYDSNLELDMSELADLILNEWACNPMDVSLNYYQQTDEANKWISMGSSCTIKVCPLNTQTVALASVTTDTNTFEEVATAEKLVITDVVDGVNHKLDVTTNTCTIRNCKKLGPRENVAVIQVGGSNILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVNQIVQVMSKRSRSLNSAAFYYRV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues TS147A
Energy difference between WT (input) and mutated protein (by FoldX) 0.576335 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:01:16)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:01:19)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:32)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:35)
Show buried residues

Minimal score value
-3.1952
Maximal score value
2.6181
Average score
-0.7076
Total score value
-186.8188

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.1615
2 D A -1.5565
3 T A -1.1048
4 P A -1.4401
5 N A -2.0200
6 A A -1.3353
7 N A -1.9738
8 S A -1.7645
9 T A -2.0755
10 Q A -3.0578
11 E A -3.1952
12 E A -2.8691
13 P A -1.7798
14 F A 0.0000
15 L A 0.6243
16 S A 0.2083
17 S A 0.0000
18 S A -0.5801
19 L A 0.0000
20 C A 0.0000
21 L A 0.0000
22 Y A 0.0000
23 Y A 0.0000
24 P A 0.0000
25 T A -0.9494
26 E A -1.1069
27 A A 0.0000
28 A A -1.0379
29 T A -1.1048
30 E A -1.3320
31 I A 0.0000
32 N A -2.0872
33 D A -2.0862
34 T A -1.9765
35 E A -3.0472
36 W A 0.0000
37 K A -2.3713
38 D A -2.9801
39 T A -1.8937
40 L A 0.0000
41 S A -1.6264
42 Q A -1.4558
43 L A -0.5929
44 F A 0.0000
45 L A -0.1698
46 T A -0.4586
47 K A -0.8486
48 G A -0.3816
49 W A 0.0000
50 P A -0.0517
51 T A -0.7518
52 G A -0.7095
53 T A -0.3537
54 L A 0.0000
55 N A -1.4884
56 F A -1.0527
57 K A -1.5644
58 E A -1.6354
59 Y A 0.0000
60 T A -0.7746
61 D A -0.9420
62 I A 0.0000
63 A A 0.0000
64 S A -0.6103
65 F A 0.0000
66 S A 0.0000
67 V A -0.2831
68 D A -1.8157
69 P A -1.5254
70 Q A -2.0654
71 L A 0.0000
72 N A -1.7131
73 C A -1.2268
74 D A -1.2899
75 Y A 0.0000
76 N A 0.0000
77 I A 0.0000
78 V A 0.0000
79 L A 0.0000
80 M A 0.0000
81 K A -0.7798
82 Y A -1.0461
83 D A -1.5275
84 S A -1.7682
85 N A -1.8656
86 L A -1.7464
87 E A -2.8040
88 L A 0.0000
89 D A -2.4847
90 M A 0.0000
91 S A -1.2005
92 E A -1.2047
93 L A 0.0000
94 A A 0.0000
95 D A -1.4061
96 L A 0.0000
97 I A 0.0000
98 L A 0.0000
99 N A -0.8547
100 E A -0.8622
101 W A -0.8087
102 A A -0.6439
103 C A -0.7891
104 N A -1.7525
105 P A -1.4382
106 M A 0.0000
107 D A -1.5187
108 V A -0.6025
109 S A -0.1313
110 L A 0.7151
111 N A -0.4796
112 Y A -0.1307
113 Y A -0.5270
114 Q A -1.2852
115 Q A 0.0000
116 T A -1.5569
117 D A -2.3668
118 E A -2.7651
119 A A -1.7041
120 N A 0.0000
121 K A -1.8391
122 W A 0.0000
123 I A 0.0000
124 S A 0.0000
125 M A 0.0000
126 G A -0.8268
127 S A -0.8428
128 S A -0.8933
129 C A 0.0000
130 T A -0.6412
131 I A 0.0000
132 K A -1.7857
133 V A 0.0000
134 C A 0.0000
135 P A 0.3521
136 L A 0.0000
137 N A -0.4128
138 T A -0.7198
139 Q A -1.0351
140 T A -0.1632
141 V A 1.0388
142 A A 1.0151
143 L A 1.3677
144 A A 0.7307
145 S A 0.5775
146 V A 1.4564
147 S A 0.5950 mutated: TS147A
148 T A -0.0670
149 D A -0.7856
150 T A -1.4185
151 N A -1.9534
152 T A -1.1476
153 F A 0.0000
154 E A -2.7324
155 E A -2.3797
156 V A -0.6747
157 A A 0.0000
158 T A -0.5494
159 A A -0.5852
160 E A -1.5419
161 K A -1.4916
162 L A 0.0000
163 V A 0.0000
164 I A -0.4350
165 T A 0.0000
166 D A -1.7771
167 V A -0.6702
168 V A 0.0516
169 D A -2.0836
170 G A -1.1660
171 V A -0.4730
172 N A -0.8011
173 H A 0.0000
174 K A -0.2387
175 L A 0.0000
176 D A -1.3597
177 V A 0.0000
178 T A -0.6658
179 T A -0.8334
180 N A -1.3945
181 T A -0.9118
182 C A 0.0000
183 T A -0.7277
184 I A 0.0000
185 R A -1.3843
186 N A -1.4254
187 C A 0.0000
188 K A -1.5803
189 K A -1.1551
190 L A 0.1943
191 G A -0.5071
192 P A -1.1960
193 R A -1.3170
194 E A -2.0030
195 N A -1.2930
196 V A 0.0000
197 A A 0.0000
198 V A 0.0000
199 I A 0.0000
200 Q A 0.0000
201 V A 0.0000
202 G A -1.2272
203 G A -0.8842
204 S A -0.4183
205 N A -0.6846
206 I A 0.9778
207 L A 0.3053
208 D A -0.9707
209 I A -0.7627
210 T A -0.6967
211 A A -1.2377
212 D A -1.9580
213 P A -1.5002
214 T A -0.9080
215 T A -0.8528
216 A A -0.8621
217 P A -1.3060
218 Q A -1.9954
219 T A -1.5342
220 E A -2.4161
221 R A -1.4726
222 M A 0.0000
223 M A -0.6861
224 R A -0.9711
225 I A 0.0000
226 N A -1.8249
227 W A -1.4658
228 K A -2.2258
229 K A -1.7855
230 W A 0.0000
231 W A -0.4427
232 Q A -0.8268
233 V A 0.0000
234 F A 0.0000
235 Y A 0.2670
236 T A -0.2120
237 V A 0.0000
238 V A 0.0000
239 D A -1.4023
240 Y A -0.3695
241 V A 0.0000
242 N A -1.2059
243 Q A -1.0293
244 I A -0.3891
245 V A 0.0000
246 Q A -1.0243
247 V A 0.0225
248 M A 0.0000
249 S A -1.2821
250 K A -1.8237
251 R A -2.1698
252 S A -1.6441
253 R A -2.0281
254 S A -1.3275
255 L A 0.2803
256 N A -0.7085
257 S A -0.0665
258 A A 0.4831
259 A A 1.4158
260 F A 2.5826
261 Y A 2.6181
262 Y A 2.0962
263 R A 0.2966
264 V A 1.3961
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Laboratory of Theory of Biopolymers 2018