| Chain sequence(s) |
A: GEKEDPSLQELQDLLESDVFEHSDGLGSGGGVGGGDLECDFEEIIRELLMDP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.8059 | |
| 2 | E | A | -2.2168 | |
| 3 | K | A | -2.3734 | |
| 4 | E | A | -2.3366 | |
| 5 | D | A | -1.4657 | |
| 6 | P | A | -0.4872 | |
| 7 | S | A | 0.0188 | |
| 8 | L | A | 1.3002 | |
| 9 | Q | A | -1.2004 | |
| 10 | E | A | -1.8359 | |
| 11 | L | A | 0.5905 | |
| 12 | Q | A | -0.9778 | |
| 13 | D | A | -1.6661 | |
| 14 | L | A | 1.4909 | |
| 15 | L | A | 1.4484 | |
| 16 | E | A | -1.4215 | |
| 17 | S | A | -0.8262 | |
| 18 | D | A | -1.5126 | |
| 19 | V | A | 1.8008 | |
| 20 | F | A | 1.9312 | |
| 21 | E | A | -1.6540 | |
| 22 | H | A | -1.3620 | |
| 23 | S | A | -0.7186 | |
| 24 | D | A | -1.9137 | |
| 25 | G | A | -0.5158 | |
| 26 | L | A | 1.3793 | |
| 27 | G | A | -0.2247 | |
| 28 | S | A | -0.3847 | |
| 29 | G | A | -0.5884 | |
| 30 | G | A | -0.6313 | |
| 31 | G | A | -0.2346 | |
| 32 | V | A | 1.6055 | |
| 33 | G | A | -0.2287 | |
| 34 | G | A | -0.6327 | |
| 35 | G | A | -0.8650 | |
| 36 | D | A | -1.5972 | |
| 37 | L | A | 0.9083 | |
| 38 | E | A | -1.4150 | |
| 39 | C | A | 0.0839 | |
| 40 | D | A | -1.3896 | |
| 41 | F | A | 0.8918 | |
| 42 | E | A | -1.5837 | |
| 43 | E | A | -1.8887 | |
| 44 | I | A | 1.1541 | |
| 45 | I | A | 1.7627 | |
| 46 | R | A | -1.7036 | |
| 47 | E | A | -1.8490 | |
| 48 | L | A | 1.4933 | |
| 49 | L | A | 2.0100 | |
| 50 | M | A | 1.0083 | |
| 51 | D | A | -1.6454 | |
| 52 | P | A | -0.5724 |