| Chain sequence(s) |
B: LAFKDELMESLEKLKKVLEKLEELLDEETAEKVKEKFKEIEEKVKELIEK
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:24)
[INFO] Main: Simulation completed successfully. (00:02:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.3707 | |
| 2 | A | B | 0.5916 | |
| 3 | F | B | 0.9956 | |
| 4 | K | B | -0.6755 | |
| 5 | D | B | -2.1545 | |
| 6 | E | B | -2.5254 | |
| 7 | L | B | -1.5573 | |
| 8 | M | B | -2.2677 | |
| 9 | E | B | -3.6695 | |
| 10 | S | B | -2.8450 | |
| 11 | L | B | 0.0000 | |
| 12 | E | B | -3.7468 | |
| 13 | K | B | -3.3038 | |
| 14 | L | B | -1.6050 | |
| 15 | K | B | -3.1826 | |
| 16 | K | B | -3.1740 | |
| 17 | V | B | -1.1220 | |
| 18 | L | B | -1.6871 | |
| 19 | E | B | -3.0344 | |
| 20 | K | B | -2.5561 | |
| 21 | L | B | -1.0093 | |
| 22 | E | B | -3.0642 | |
| 23 | E | B | -2.4685 | |
| 24 | L | B | -0.2501 | |
| 25 | L | B | -1.4675 | |
| 26 | D | B | -3.2511 | |
| 27 | E | B | -4.3373 | |
| 28 | E | B | -4.3534 | |
| 29 | T | B | -2.9569 | |
| 30 | A | B | 0.0000 | |
| 31 | E | B | -5.0713 | |
| 32 | K | B | -4.7565 | |
| 33 | V | B | -3.4487 | |
| 34 | K | B | -4.5987 | |
| 35 | E | B | -5.0115 | |
| 36 | K | B | -4.4665 | |
| 37 | F | B | 0.0000 | |
| 38 | K | B | -4.6618 | |
| 39 | E | B | -4.5836 | |
| 40 | I | B | -2.9054 | |
| 41 | E | B | -3.6694 | |
| 42 | E | B | -4.2296 | |
| 43 | K | B | -3.6264 | |
| 44 | V | B | -2.2987 | |
| 45 | K | B | -3.2844 | |
| 46 | E | B | -3.6511 | |
| 47 | L | B | -1.7104 | |
| 48 | I | B | -1.6708 | |
| 49 | E | B | -3.0388 | |
| 50 | K | B | -2.7017 |