Project name: aae308f6a74e748

Status: done

Started: 2026-06-18 08:07:54
Settings
Chain sequence(s) A: EVQLLESGGGLVQPGGSLRLSCAASGFTFSSQAMSWVRQAPGKGIEWLSTISAEGGSTSYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDFKFLWAPTGGQGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:52)
Show buried residues

Minimal score value
-2.6287
Maximal score value
2.2987
Average score
-0.6779
Total score value
-79.9923

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -1.9828
2 V A -1.1620
3 Q A -1.0341
4 L A 0.0000
5 L A 0.8254
6 E A -0.1745
7 S A -0.7671
8 G A -1.2481
9 G A -0.8432
10 G A -0.0567
11 L A 1.0193
12 V A -0.0655
13 Q A -1.3616
14 P A -1.6051
15 G A -1.3715
16 G A -0.9279
17 S A -1.3070
18 L A -0.9868
19 R A -2.2735
20 L A 0.0000
21 S A -0.5246
22 C A 0.0000
23 A A -0.1733
24 A A 0.0000
25 S A -0.8939
26 G A -1.1059
27 F A -0.5509
28 T A -0.3071
29 F A 0.0000
30 S A -1.3339
31 S A -0.8306
32 Q A -1.0817
33 A A -0.6593
34 M A 0.0000
35 S A 0.0000
36 W A 0.0000
37 V A 0.0000
38 R A 0.0000
39 Q A -1.0210
40 A A -1.3918
41 P A -1.1213
42 G A -1.5241
43 K A -2.2765
44 G A -1.3353
45 I A 0.2304
46 E A -0.2716
47 W A 0.5637
48 L A 0.0000
49 S A 0.0000
50 T A 0.0000
51 I A 0.0000
52 S A -1.0503
53 A A -1.4125
54 E A -2.3773
55 G A -1.6160
56 G A -1.2568
57 S A -0.8798
58 T A -0.3490
59 S A -0.5678
60 Y A -0.9294
61 A A -1.3054
62 D A -2.4856
63 S A -1.6711
64 V A 0.0000
65 K A -2.6287
66 G A -1.7492
67 R A -1.5553
68 F A 0.0000
69 T A -0.9780
70 I A 0.0000
71 S A -0.5136
72 R A -1.1997
73 D A -1.6921
74 N A -2.0048
75 S A -1.5951
76 K A -2.3809
77 N A -1.7371
78 T A -1.0082
79 L A 0.0000
80 Y A -0.6494
81 L A 0.0000
82 Q A -1.5666
83 M A 0.0000
84 N A -1.4981
85 S A -1.2182
86 L A 0.0000
87 R A -2.3187
88 A A -1.7391
89 E A -2.2510
90 D A 0.0000
91 T A -0.8683
92 A A 0.0000
93 V A -0.3305
94 Y A 0.0000
95 Y A 0.0000
96 C A 0.0000
97 A A -0.3083
98 K A -0.9515
99 D A -0.7024
100 F A 1.0432
101 K A -0.0236
102 F A 1.4940
103 L A 2.2987
104 W A 1.8204
105 A A 0.5433
106 P A 0.0695
107 T A -0.2179
108 G A -0.6475
109 G A -0.5948
110 Q A -1.2172
111 G A -0.7736
112 T A -0.8283
113 Q A -1.1821
114 V A 0.0000
115 T A -0.2945
116 V A 0.0000
117 S A -0.6992
118 S A -0.5055
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018