| Chain sequence(s) |
A: AMEEEEEEQLQLVESGGGLVQPGGSLRLSCAASGFSLDPYVIGWFRQAPGKEREGVSCITSRAASRTSVDSVNERFTISRDNAKNTVDLHINNLKPEDSGVYYCAAVPPAKLPLFSLCRSLPAKYDYWGQGTQVTVSSAHHSEDPSGSYPYDVPDYAGSGASAYRPSRTLCGGELVDTLQLVCGDRGFYFSRPASRVSRRPRGIVEECCFRSCDLALLETYCATPAKSEAAALEHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:03)
[INFO] Main: Simulation completed successfully. (00:04:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.2173 | |
| 2 | M | A | -0.6601 | |
| 3 | E | A | -3.0073 | |
| 4 | E | A | -4.1328 | |
| 5 | E | A | -4.8407 | |
| 6 | E | A | -5.1850 | |
| 7 | E | A | -4.7875 | |
| 8 | E | A | -4.2277 | |
| 9 | Q | A | -2.9380 | |
| 10 | L | A | 0.0000 | |
| 11 | Q | A | -1.0911 | |
| 12 | L | A | 0.0000 | |
| 13 | V | A | -0.1577 | |
| 14 | E | A | 0.0000 | |
| 15 | S | A | 0.0000 | |
| 16 | G | A | -1.6261 | |
| 17 | G | A | -0.7845 | |
| 18 | G | A | 0.0624 | |
| 19 | L | A | 0.8333 | |
| 20 | V | A | 0.0000 | |
| 21 | Q | A | -1.6160 | |
| 22 | P | A | -1.7925 | |
| 23 | G | A | -1.8822 | |
| 24 | G | A | -1.4708 | |
| 25 | S | A | -1.6801 | |
| 26 | L | A | -1.2701 | |
| 27 | R | A | -2.1602 | |
| 28 | L | A | 0.0000 | |
| 29 | S | A | 0.0000 | |
| 30 | C | A | 0.0000 | |
| 31 | A | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | S | A | 0.0000 | |
| 34 | G | A | -0.8179 | |
| 35 | F | A | -0.2612 | |
| 36 | S | A | -0.5455 | |
| 37 | L | A | 0.0000 | |
| 38 | D | A | -1.5622 | |
| 39 | P | A | -0.8118 | |
| 40 | Y | A | 0.0000 | |
| 41 | V | A | 0.0000 | |
| 42 | I | A | 0.0000 | |
| 43 | G | A | 0.0000 | |
| 44 | W | A | 0.0000 | |
| 45 | F | A | 0.0000 | |
| 46 | R | A | -1.4697 | |
| 47 | Q | A | -2.0314 | |
| 48 | A | A | -1.9680 | |
| 49 | P | A | -1.3675 | |
| 50 | G | A | -1.8929 | |
| 51 | K | A | -3.2894 | |
| 52 | E | A | -3.4698 | |
| 53 | R | A | -2.4588 | |
| 54 | E | A | -2.3110 | |
| 55 | G | A | -1.0973 | |
| 56 | V | A | 0.0000 | |
| 57 | S | A | 0.0000 | |
| 58 | C | A | 0.0000 | |
| 59 | I | A | 0.0000 | |
| 60 | T | A | -0.1943 | |
| 61 | S | A | -0.8342 | |
| 62 | R | A | -1.4320 | |
| 63 | A | A | -1.2339 | |
| 64 | A | A | -1.2540 | |
| 65 | S | A | -1.2278 | |
| 66 | R | A | -2.1786 | |
| 67 | T | A | -0.8225 | |
| 68 | S | A | 0.0000 | |
| 69 | V | A | 1.2273 | |
| 70 | D | A | 0.3026 | |
| 71 | S | A | -0.0868 | |
| 72 | V | A | 0.9300 | |
| 73 | N | A | -0.9464 | |
| 74 | E | A | -2.2223 | |
| 75 | R | A | -1.8241 | |
| 76 | F | A | 0.0000 | |
| 77 | T | A | -0.5336 | |
| 78 | I | A | 0.0000 | |
| 79 | S | A | 0.0000 | |
| 80 | R | A | 0.0000 | |
| 81 | D | A | -1.3759 | |
| 82 | N | A | -1.8918 | |
| 83 | A | A | -1.9351 | |
| 84 | K | A | -2.3096 | |
| 85 | N | A | -1.4986 | |
| 86 | T | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | D | A | -0.5750 | |
| 89 | L | A | 0.0000 | |
| 90 | H | A | -1.4008 | |
| 91 | I | A | 0.0000 | |
| 92 | N | A | -2.3343 | |
| 93 | N | A | -2.5341 | |
| 94 | L | A | 0.0000 | |
| 95 | K | A | -2.4117 | |
| 96 | P | A | -1.8797 | |
| 97 | E | A | -2.2752 | |
| 98 | D | A | 0.0000 | |
| 99 | S | A | -0.9902 | |
| 100 | G | A | -1.0431 | |
| 101 | V | A | -0.5088 | |
| 102 | Y | A | 0.0000 | |
| 103 | Y | A | -0.4421 | |
| 104 | C | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | A | A | 0.0000 | |
| 107 | V | A | 0.0000 | |
| 108 | P | A | -0.7581 | |
| 109 | P | A | -0.6065 | |
| 110 | A | A | -0.8171 | |
| 111 | K | A | -1.7709 | |
| 112 | L | A | 0.1690 | |
| 113 | P | A | 1.0566 | |
| 114 | L | A | 2.2136 | |
| 115 | F | A | 2.8557 | |
| 116 | S | A | 1.6173 | |
| 117 | L | A | 2.1459 | |
| 118 | C | A | 1.4395 | |
| 119 | R | A | 0.1908 | |
| 120 | S | A | -0.1695 | |
| 121 | L | A | 0.1008 | |
| 122 | P | A | -0.7362 | |
| 123 | A | A | -0.4598 | |
| 124 | K | A | -1.2808 | |
| 125 | Y | A | 0.0000 | |
| 126 | D | A | -1.4942 | |
| 127 | Y | A | -0.5448 | |
| 128 | W | A | -0.1927 | |
| 129 | G | A | -0.4524 | |
| 130 | Q | A | -1.2384 | |
| 131 | G | A | -0.7879 | |
| 132 | T | A | 0.0000 | |
| 133 | Q | A | -1.1612 | |
| 134 | V | A | 0.0000 | |
| 135 | T | A | -0.4072 | |
| 136 | V | A | 0.0000 | |
| 137 | S | A | -0.8794 | |
| 138 | S | A | -1.0502 | |
| 139 | A | A | -0.8926 | |
| 140 | H | A | -2.0347 | |
| 141 | H | A | -2.2919 | |
| 142 | S | A | -2.5287 | |
| 143 | E | A | -3.4286 | |
| 144 | D | A | -3.2219 | |
| 145 | P | A | -2.0027 | |
| 146 | S | A | -1.2499 | |
| 147 | G | A | -0.9995 | |
| 148 | S | A | 0.0137 | |
| 149 | Y | A | 1.0609 | |
| 150 | P | A | 0.6233 | |
| 151 | Y | A | 1.2694 | |
| 152 | D | A | -0.4768 | |
| 153 | V | A | 0.9962 | |
| 154 | P | A | -0.0450 | |
| 155 | D | A | -1.0608 | |
| 156 | Y | A | 0.5463 | |
| 157 | A | A | -0.2075 | |
| 158 | G | A | -0.4474 | |
| 159 | S | A | -0.4845 | |
| 160 | G | A | -0.6832 | |
| 161 | A | A | -0.1805 | |
| 162 | S | A | -0.2012 | |
| 163 | A | A | -0.1058 | |
| 164 | Y | A | 0.3029 | |
| 165 | R | A | -1.6745 | |
| 166 | P | A | -1.5494 | |
| 167 | S | A | -2.0032 | |
| 168 | R | A | -2.6124 | |
| 169 | T | A | -1.2859 | |
| 170 | L | A | 0.0000 | |
| 171 | C | A | -0.2786 | |
| 172 | G | A | -0.9806 | |
| 173 | G | A | -1.8632 | |
| 174 | E | A | -2.5241 | |
| 175 | L | A | 0.0000 | |
| 176 | V | A | 0.0000 | |
| 177 | D | A | -2.1081 | |
| 178 | T | A | -0.6472 | |
| 179 | L | A | 0.0000 | |
| 180 | Q | A | -0.8904 | |
| 181 | L | A | 0.7979 | |
| 182 | V | A | 0.4053 | |
| 183 | C | A | 0.0000 | |
| 184 | G | A | -0.9946 | |
| 185 | D | A | -2.4115 | |
| 186 | R | A | -1.9978 | |
| 187 | G | A | -1.2911 | |
| 188 | F | A | 0.0000 | |
| 189 | Y | A | -0.1013 | |
| 190 | F | A | 0.0000 | |
| 191 | S | A | -1.2371 | |
| 192 | R | A | -1.7909 | |
| 193 | P | A | -2.3547 | |
| 194 | A | A | -2.3468 | |
| 195 | S | A | -1.6859 | |
| 196 | R | A | -1.8122 | |
| 197 | V | A | 0.0580 | |
| 198 | S | A | -1.5776 | |
| 199 | R | A | -3.0627 | |
| 200 | R | A | -3.3651 | |
| 201 | P | A | -2.5454 | |
| 202 | R | A | -2.5487 | |
| 203 | G | A | -1.0952 | |
| 204 | I | A | 0.0000 | |
| 205 | V | A | 0.6197 | |
| 206 | E | A | 0.0286 | |
| 207 | E | A | 0.0000 | |
| 208 | C | A | 0.0000 | |
| 209 | C | A | 0.3045 | |
| 210 | F | A | 1.0455 | |
| 211 | R | A | -1.2448 | |
| 212 | S | A | -1.5852 | |
| 213 | C | A | 0.0000 | |
| 214 | D | A | -1.5713 | |
| 215 | L | A | 0.6358 | |
| 216 | A | A | 0.1443 | |
| 217 | L | A | -0.0657 | |
| 218 | L | A | 0.0000 | |
| 219 | E | A | -0.4026 | |
| 220 | T | A | -0.1956 | |
| 221 | Y | A | 0.0000 | |
| 222 | C | A | 0.0000 | |
| 223 | A | A | -0.7870 | |
| 224 | T | A | -0.6775 | |
| 225 | P | A | -1.1739 | |
| 226 | A | A | -1.3523 | |
| 227 | K | A | -2.3492 | |
| 228 | S | A | -1.9051 | |
| 229 | E | A | -2.0622 | |
| 230 | A | A | -0.9966 | |
| 231 | A | A | -0.8976 | |
| 232 | A | A | -0.6320 | |
| 233 | L | A | -0.2823 | |
| 234 | E | A | -2.2036 | |
| 235 | H | A | -2.5619 | |
| 236 | H | A | -2.7317 | |
| 237 | H | A | -2.9513 | |
| 238 | H | A | -3.0693 | |
| 239 | H | A | -2.6143 | |
| 240 | H | A | -2.1177 |