| Chain sequence(s) |
A: MAKTQAEINKRLDAYAKGTVDSPYRIKKATSYDPSFGVMEAGAIDADGYYHAQCQDLITDYVLWLTDNKVRTWGNAKDQIKQSYGTGFKIHENKPSTVPKKGWIAVFTSGSYQQWGHIGIVYDGGNTSTFTILEQNWNGYANKKPTKRVDNYYGLTHFIEIPVKAGSSGSSGPGSSGSSGWKTNKYGTLYKSESASFTPNTDIITRTTGPFRSMPQSGVLKAGQTIHYDEVMKQDGHVWVGYTGNSGQRIYLPVRTWNKSTNTLGVLWGTIKLEHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:07)
[INFO] Main: Simulation completed successfully. (00:06:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7682 | |
| 2 | A | A | 0.1530 | |
| 3 | K | A | -0.3805 | |
| 4 | T | A | -0.6020 | |
| 5 | Q | A | -0.9628 | |
| 6 | A | A | -1.3192 | |
| 7 | E | A | -1.8108 | |
| 8 | I | A | 0.0000 | |
| 9 | N | A | -1.5011 | |
| 10 | K | A | -2.3231 | |
| 11 | R | A | 0.0000 | |
| 12 | L | A | 0.0000 | |
| 13 | D | A | -1.6466 | |
| 14 | A | A | -1.6831 | |
| 15 | Y | A | 0.0000 | |
| 16 | A | A | -1.5271 | |
| 17 | K | A | -1.9536 | |
| 18 | G | A | -1.7856 | |
| 19 | T | A | -1.5113 | |
| 20 | V | A | 0.0000 | |
| 21 | D | A | -1.9220 | |
| 22 | S | A | -1.0382 | |
| 23 | P | A | -0.8480 | |
| 24 | Y | A | -0.8645 | |
| 25 | R | A | -1.5708 | |
| 26 | I | A | -1.5545 | |
| 27 | K | A | -2.6411 | |
| 28 | K | A | -2.4471 | |
| 29 | A | A | -0.8778 | |
| 30 | T | A | -0.2082 | |
| 31 | S | A | 0.7198 | |
| 32 | Y | A | 1.1611 | |
| 33 | D | A | 0.6705 | |
| 34 | P | A | 0.1744 | |
| 35 | S | A | 0.3921 | |
| 36 | F | A | 1.0876 | |
| 37 | G | A | 1.1192 | |
| 38 | V | A | 1.5260 | |
| 39 | M | A | 0.0000 | |
| 40 | E | A | -1.0807 | |
| 41 | A | A | -1.5673 | |
| 42 | G | A | 0.0000 | |
| 43 | A | A | 0.0000 | |
| 44 | I | A | 0.0000 | |
| 45 | D | A | -0.5390 | |
| 46 | A | A | 0.0000 | |
| 47 | D | A | -1.3999 | |
| 48 | G | A | -0.3158 | |
| 49 | Y | A | 1.0915 | |
| 50 | Y | A | 1.5335 | |
| 51 | H | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | Q | A | -0.0677 | |
| 54 | C | A | 0.0000 | |
| 55 | Q | A | 0.0000 | |
| 56 | D | A | 0.0000 | |
| 57 | L | A | 0.0000 | |
| 58 | I | A | 0.0000 | |
| 59 | T | A | 0.0000 | |
| 60 | D | A | 0.0000 | |
| 61 | Y | A | 0.0000 | |
| 62 | V | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | W | A | -1.0787 | |
| 65 | L | A | 0.0000 | |
| 66 | T | A | -1.4461 | |
| 67 | D | A | -2.0931 | |
| 68 | N | A | -2.7360 | |
| 69 | K | A | -2.8161 | |
| 70 | V | A | -1.6483 | |
| 71 | R | A | -1.4624 | |
| 72 | T | A | 0.0000 | |
| 73 | W | A | 0.4629 | |
| 74 | G | A | -0.1621 | |
| 75 | N | A | -0.5112 | |
| 76 | A | A | 0.0000 | |
| 77 | K | A | -1.1360 | |
| 78 | D | A | 0.0000 | |
| 79 | Q | A | 0.0000 | |
| 80 | I | A | -0.7471 | |
| 81 | K | A | -1.4683 | |
| 82 | Q | A | -0.9216 | |
| 83 | S | A | -0.8151 | |
| 84 | Y | A | 0.0000 | |
| 85 | G | A | -1.0162 | |
| 86 | T | A | -0.7250 | |
| 87 | G | A | -0.9309 | |
| 88 | F | A | -1.0056 | |
| 89 | K | A | -1.9535 | |
| 90 | I | A | -1.1956 | |
| 91 | H | A | -1.5043 | |
| 92 | E | A | -2.3012 | |
| 93 | N | A | -1.8494 | |
| 94 | K | A | -2.2859 | |
| 95 | P | A | -1.2770 | |
| 96 | S | A | -0.8793 | |
| 97 | T | A | -1.0334 | |
| 98 | V | A | -0.3951 | |
| 99 | P | A | 0.0000 | |
| 100 | K | A | -1.9678 | |
| 101 | K | A | 0.0000 | |
| 102 | G | A | 0.0000 | |
| 103 | W | A | -0.7925 | |
| 104 | I | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | V | A | 0.0000 | |
| 107 | F | A | 0.0000 | |
| 108 | T | A | -0.7563 | |
| 109 | S | A | -0.8472 | |
| 110 | G | A | -0.9154 | |
| 111 | S | A | -0.8608 | |
| 112 | Y | A | 0.0000 | |
| 113 | Q | A | -2.0013 | |
| 114 | Q | A | -1.8194 | |
| 115 | W | A | -0.8114 | |
| 116 | G | A | 0.0000 | |
| 117 | H | A | -0.5689 | |
| 118 | I | A | 0.0000 | |
| 119 | G | A | 0.0000 | |
| 120 | I | A | 0.0000 | |
| 121 | V | A | 0.0000 | |
| 122 | Y | A | -0.5792 | |
| 123 | D | A | -1.1545 | |
| 124 | G | A | -1.2814 | |
| 125 | G | A | -0.8745 | |
| 126 | N | A | -0.9963 | |
| 127 | T | A | -0.8083 | |
| 128 | S | A | -0.6937 | |
| 129 | T | A | -0.3673 | |
| 130 | F | A | 0.0000 | |
| 131 | T | A | -0.1764 | |
| 132 | I | A | 0.0000 | |
| 133 | L | A | 0.0000 | |
| 134 | E | A | 0.0000 | |
| 135 | Q | A | 0.0000 | |
| 136 | N | A | -0.4969 | |
| 137 | W | A | -0.2418 | |
| 138 | N | A | -1.0112 | |
| 139 | G | A | -0.4081 | |
| 140 | Y | A | 0.9768 | |
| 141 | A | A | 0.0000 | |
| 142 | N | A | 0.0297 | |
| 143 | K | A | -1.0857 | |
| 144 | K | A | -1.5850 | |
| 145 | P | A | 0.0000 | |
| 146 | T | A | -1.1717 | |
| 147 | K | A | -1.0611 | |
| 148 | R | A | -0.1588 | |
| 149 | V | A | 0.9691 | |
| 150 | D | A | 0.0000 | |
| 151 | N | A | -0.6254 | |
| 152 | Y | A | 0.1786 | |
| 153 | Y | A | 0.7093 | |
| 154 | G | A | -0.0729 | |
| 155 | L | A | 0.0000 | |
| 156 | T | A | -0.7462 | |
| 157 | H | A | -1.1828 | |
| 158 | F | A | 0.0000 | |
| 159 | I | A | 0.0000 | |
| 160 | E | A | -1.3592 | |
| 161 | I | A | 0.0000 | |
| 162 | P | A | -0.2876 | |
| 163 | V | A | 0.2340 | |
| 164 | K | A | -0.5024 | |
| 165 | A | A | -0.5058 | |
| 166 | G | A | -0.6884 | |
| 167 | S | A | -0.7620 | |
| 168 | S | A | -0.7764 | |
| 169 | G | A | -0.9937 | |
| 170 | S | A | -0.7612 | |
| 171 | S | A | -0.8717 | |
| 172 | G | A | -0.9860 | |
| 173 | P | A | -1.0583 | |
| 174 | G | A | -1.2087 | |
| 175 | S | A | -1.1958 | |
| 176 | S | A | -1.0967 | |
| 177 | G | A | -1.1430 | |
| 178 | S | A | -0.6901 | |
| 179 | S | A | -0.8518 | |
| 180 | G | A | -1.1027 | |
| 181 | W | A | -0.9231 | |
| 182 | K | A | -1.9834 | |
| 183 | T | A | -1.1953 | |
| 184 | N | A | -1.2638 | |
| 185 | K | A | -1.3675 | |
| 186 | Y | A | 0.1623 | |
| 187 | G | A | -0.6322 | |
| 188 | T | A | 0.0000 | |
| 189 | L | A | -0.5123 | |
| 190 | Y | A | -0.6405 | |
| 191 | K | A | -1.1749 | |
| 192 | S | A | -1.2910 | |
| 193 | E | A | -1.2453 | |
| 194 | S | A | -1.6084 | |
| 195 | A | A | 0.0000 | |
| 196 | S | A | 0.0000 | |
| 197 | F | A | 0.0000 | |
| 198 | T | A | -1.0410 | |
| 199 | P | A | 0.0000 | |
| 200 | N | A | -1.9341 | |
| 201 | T | A | -1.5450 | |
| 202 | D | A | -1.6149 | |
| 203 | I | A | 0.0000 | |
| 204 | I | A | 0.7087 | |
| 205 | T | A | 0.0000 | |
| 206 | R | A | -0.6042 | |
| 207 | T | A | -0.8255 | |
| 208 | T | A | -0.3611 | |
| 209 | G | A | 0.0000 | |
| 210 | P | A | 0.0000 | |
| 211 | F | A | -0.4291 | |
| 212 | R | A | -1.1309 | |
| 213 | S | A | -0.8142 | |
| 214 | M | A | -0.6343 | |
| 215 | P | A | -1.0752 | |
| 216 | Q | A | -1.2162 | |
| 217 | S | A | -0.6145 | |
| 218 | G | A | 0.0405 | |
| 219 | V | A | 0.5322 | |
| 220 | L | A | -0.4816 | |
| 221 | K | A | -2.0314 | |
| 222 | A | A | -1.9600 | |
| 223 | G | A | -1.8379 | |
| 224 | Q | A | -1.9195 | |
| 225 | T | A | -0.9458 | |
| 226 | I | A | 0.0000 | |
| 227 | H | A | -1.4669 | |
| 228 | Y | A | 0.0000 | |
| 229 | D | A | -1.8346 | |
| 230 | E | A | -1.4270 | |
| 231 | V | A | 0.0000 | |
| 232 | M | A | 0.0000 | |
| 233 | K | A | 0.0000 | |
| 234 | Q | A | -0.6490 | |
| 235 | D | A | -1.2740 | |
| 236 | G | A | -1.2940 | |
| 237 | H | A | -0.7772 | |
| 238 | V | A | 0.0000 | |
| 239 | W | A | 0.0000 | |
| 240 | V | A | 0.0000 | |
| 241 | G | A | 0.0000 | |
| 242 | Y | A | 0.0000 | |
| 243 | T | A | -1.2576 | |
| 244 | G | A | -1.4395 | |
| 245 | N | A | -1.8279 | |
| 246 | S | A | -1.4744 | |
| 247 | G | A | -1.5756 | |
| 248 | Q | A | -1.7091 | |
| 249 | R | A | -1.1749 | |
| 250 | I | A | -0.5421 | |
| 251 | Y | A | -0.1563 | |
| 252 | L | A | 0.0000 | |
| 253 | P | A | 0.0000 | |
| 254 | V | A | 0.0000 | |
| 255 | R | A | 0.3878 | |
| 256 | T | A | 0.0195 | |
| 257 | W | A | 0.0000 | |
| 258 | N | A | -1.6949 | |
| 259 | K | A | -2.5771 | |
| 260 | S | A | -1.8510 | |
| 261 | T | A | -1.4965 | |
| 262 | N | A | -1.8371 | |
| 263 | T | A | -0.7278 | |
| 264 | L | A | 0.4949 | |
| 265 | G | A | 0.9343 | |
| 266 | V | A | 2.0092 | |
| 267 | L | A | 1.2020 | |
| 268 | W | A | 0.2875 | |
| 269 | G | A | -0.0883 | |
| 270 | T | A | -0.1681 | |
| 271 | I | A | 0.2776 | |
| 272 | K | A | -0.7852 | |
| 273 | L | A | -0.3158 | |
| 274 | E | A | -2.3702 | |
| 275 | H | A | -2.5409 | |
| 276 | H | A | -2.7130 | |
| 277 | H | A | -2.9361 | |
| 278 | H | A | -2.6699 | |
| 279 | H | A | -2.4004 | |
| 280 | H | A | -1.8823 |