| Chain sequence(s) |
A: QVQLQESGGGLVQAGGSLRLSSAASGRTFSNYNMGWLRQAPGNEREFVAAITSSGTSTYYADSVNGRFTISRDNAKNTVYLQMNSLNPEDTAVYYSAAGRYNNLRDVSGYLYRGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.7571 | |
| 2 | V | A | -1.4831 | |
| 3 | Q | A | -2.1412 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.9532 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.1928 | |
| 8 | G | A | -1.0331 | |
| 9 | G | A | -0.8460 | |
| 10 | G | A | -0.0738 | |
| 11 | L | A | 1.0245 | |
| 12 | V | A | 0.0469 | |
| 13 | Q | A | -1.1925 | |
| 14 | A | A | -1.3734 | |
| 15 | G | A | -1.3225 | |
| 16 | G | A | -0.9134 | |
| 17 | S | A | -1.3842 | |
| 18 | L | A | -1.0844 | |
| 19 | R | A | -2.2986 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.8431 | |
| 22 | S | A | 0.0000 | |
| 23 | A | A | -1.1454 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.5512 | |
| 26 | G | A | -1.9527 | |
| 27 | R | A | -2.4621 | |
| 28 | T | A | -1.7034 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.7732 | |
| 31 | N | A | -2.1271 | |
| 32 | Y | A | 0.0000 | |
| 33 | N | A | -1.1050 | |
| 34 | M | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | L | A | 0.0000 | |
| 38 | R | A | -1.4636 | |
| 39 | Q | A | -2.1609 | |
| 40 | A | A | -2.0248 | |
| 41 | P | A | -1.3386 | |
| 42 | G | A | -1.8194 | |
| 43 | N | A | -3.0465 | |
| 44 | E | A | -3.6836 | |
| 45 | R | A | -3.3868 | |
| 46 | E | A | -2.0381 | |
| 47 | F | A | 0.0000 | |
| 48 | V | A | 0.0000 | |
| 49 | A | A | 0.0000 | |
| 50 | A | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | T | A | -0.8131 | |
| 53 | S | A | -1.1647 | |
| 54 | S | A | -0.7669 | |
| 55 | G | A | -0.6587 | |
| 56 | T | A | -0.3310 | |
| 57 | S | A | -0.2031 | |
| 58 | T | A | -0.1218 | |
| 59 | Y | A | -0.3184 | |
| 60 | Y | A | -0.7909 | |
| 61 | A | A | 0.0000 | |
| 62 | D | A | -2.2382 | |
| 63 | S | A | -1.6685 | |
| 64 | V | A | 0.0000 | |
| 65 | N | A | -2.1536 | |
| 66 | G | A | -1.6791 | |
| 67 | R | A | -1.5369 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.9360 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.4677 | |
| 72 | R | A | -0.9961 | |
| 73 | D | A | -1.5066 | |
| 74 | N | A | -1.8885 | |
| 75 | A | A | -1.4234 | |
| 76 | K | A | -2.3011 | |
| 77 | N | A | -2.0454 | |
| 78 | T | A | -1.3135 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.6068 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -1.6247 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -1.9621 | |
| 85 | S | A | -1.3452 | |
| 86 | L | A | 0.0000 | |
| 87 | N | A | -1.9721 | |
| 88 | P | A | -1.6713 | |
| 89 | E | A | -2.1612 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.8734 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | -0.7738 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | -0.9731 | |
| 96 | S | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | G | A | 0.0000 | |
| 100 | R | A | -1.7603 | |
| 101 | Y | A | -0.8039 | |
| 102 | N | A | -1.7590 | |
| 103 | N | A | -1.7221 | |
| 104 | L | A | -1.3482 | |
| 105 | R | A | -2.0790 | |
| 106 | D | A | -1.4940 | |
| 107 | V | A | -0.2718 | |
| 108 | S | A | 0.0233 | |
| 109 | G | A | 0.0000 | |
| 110 | Y | A | 0.0000 | |
| 111 | L | A | 1.3525 | |
| 112 | Y | A | 0.2000 | |
| 113 | R | A | -1.2345 | |
| 114 | G | A | -1.6995 | |
| 115 | Q | A | -1.8821 | |
| 116 | G | A | -1.2849 | |
| 117 | T | A | 0.0000 | |
| 118 | Q | A | -1.0862 | |
| 119 | V | A | 0.0000 | |
| 120 | T | A | -0.2722 | |
| 121 | V | A | 0.0000 | |
| 122 | S | A | -0.7108 | |
| 123 | S | A | -0.7889 |