| Chain sequence(s) |
B: SFAERLKKALKEVEAMAKKMEAEGYEELAAALKKMAEKIKKKLEEVEKKL
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:46)
[INFO] Main: Simulation completed successfully. (00:02:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -0.5563 | |
| 2 | F | B | -0.2374 | |
| 3 | A | B | 0.0000 | |
| 4 | E | B | -3.1450 | |
| 5 | R | B | -3.3324 | |
| 6 | L | B | 0.0000 | |
| 7 | K | B | -3.9267 | |
| 8 | K | B | -4.1902 | |
| 9 | A | B | -3.1406 | |
| 10 | L | B | -3.6470 | |
| 11 | K | B | -3.8955 | |
| 12 | E | B | -3.4355 | |
| 13 | V | B | 0.0000 | |
| 14 | E | B | -3.7311 | |
| 15 | A | B | -2.7458 | |
| 16 | M | B | -2.0732 | |
| 17 | A | B | 0.0000 | |
| 18 | K | B | -3.9086 | |
| 19 | K | B | -3.1994 | |
| 20 | M | B | -2.8574 | |
| 21 | E | B | -3.8044 | |
| 22 | A | B | -2.8178 | |
| 23 | E | B | -3.0666 | |
| 24 | G | B | -2.4795 | |
| 25 | Y | B | -1.9042 | |
| 26 | E | B | -3.1171 | |
| 27 | E | B | -2.4867 | |
| 28 | L | B | -1.6050 | |
| 29 | A | B | 0.0000 | |
| 30 | A | B | -2.0930 | |
| 31 | A | B | -1.4684 | |
| 32 | L | B | 0.0000 | |
| 33 | K | B | -3.4010 | |
| 34 | K | B | -3.4426 | |
| 35 | M | B | -2.5283 | |
| 36 | A | B | 0.0000 | |
| 37 | E | B | -4.6206 | |
| 38 | K | B | -4.3903 | |
| 39 | I | B | -3.8293 | |
| 40 | K | B | -4.6794 | |
| 41 | K | B | -4.9890 | |
| 42 | K | B | -4.6643 | |
| 43 | L | B | 0.0000 | |
| 44 | E | B | -5.1338 | |
| 45 | E | B | -4.9536 | |
| 46 | V | B | 0.0000 | |
| 47 | E | B | -3.9272 | |
| 48 | K | B | -4.0833 | |
| 49 | K | B | -3.0689 | |
| 50 | L | B | -0.7228 |