| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVVNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGRGTIGHPLFNKLGDTENPTEPLHDGPDVRVSFSFDPKQTQLFIVGCEPPTGEHWDLAAPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRAGPVGHPLPDDPPPSPLYVPPPASSPYATLPPYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPKENVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9485 | |
| 2 | L | A | 1.9773 | |
| 3 | P | A | 0.7078 | |
| 4 | P | A | 0.1181 | |
| 5 | T | A | 0.2114 | |
| 6 | T | A | 0.1593 | |
| 7 | P | A | 0.2691 | |
| 8 | V | A | 1.2492 | |
| 9 | A | A | 0.0488 | |
| 10 | K | A | -1.1428 | |
| 11 | V | A | -0.3933 | |
| 12 | Q | A | -1.4281 | |
| 13 | S | A | -1.4749 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.1282 | |
| 16 | E | A | -2.3053 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.5281 | |
| 20 | P | A | 0.1397 | |
| 21 | T | A | 0.1039 | |
| 22 | S | A | -0.1800 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1230 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2455 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7238 | |
| 31 | R | A | -2.6846 | |
| 32 | L | A | -0.8264 | |
| 33 | L | A | 1.0568 | |
| 34 | T | A | 1.3453 | |
| 35 | V | A | 1.9073 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2815 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7203 | |
| 40 | E | A | -1.9891 | |
| 41 | D | A | -0.7316 | |
| 42 | I | A | 1.4158 | |
| 43 | V | A | 2.3666 | |
| 44 | V | A | 1.7875 | |
| 45 | N | A | -0.4958 | |
| 46 | G | A | -0.3103 | |
| 47 | K | A | -0.0191 | |
| 48 | V | A | 2.3631 | |
| 49 | V | A | 2.8036 | |
| 50 | V | A | 1.6314 | |
| 51 | P | A | 0.4092 | |
| 52 | K | A | -0.6895 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.2463 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.6437 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3388 | |
| 70 | K | A | -1.8751 | |
| 71 | F | A | -0.9339 | |
| 72 | A | A | -0.6168 | |
| 73 | L | A | -0.9613 | |
| 74 | P | A | -1.2679 | |
| 75 | Q | A | -2.4749 | |
| 76 | K | A | -3.0927 | |
| 77 | D | A | -2.9790 | |
| 78 | F | A | -1.6517 | |
| 79 | Y | A | -1.9190 | |
| 80 | D | A | -2.7290 | |
| 81 | P | A | -2.3252 | |
| 82 | E | A | -3.0353 | |
| 83 | K | A | -3.3908 | |
| 84 | E | A | -2.4541 | |
| 85 | R | A | -1.2853 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6258 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0037 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3820 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.8137 | |
| 99 | G | A | -0.6309 | |
| 100 | P | A | -0.5357 | |
| 101 | L | A | -0.2389 | |
| 102 | G | A | -0.9118 | |
| 103 | R | A | -1.6759 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.6460 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1006 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.2233 | |
| 110 | L | A | 0.2071 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0849 | |
| 113 | K | A | -0.3286 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2387 | |
| 117 | T | A | -1.1024 | |
| 118 | E | A | -2.4147 | |
| 119 | N | A | -2.4758 | |
| 120 | P | A | -1.8944 | |
| 121 | T | A | -1.6732 | |
| 122 | E | A | -2.5586 | |
| 123 | P | A | -1.5700 | |
| 124 | L | A | -0.9563 | |
| 125 | H | A | -2.0948 | |
| 126 | D | A | -2.5126 | |
| 127 | G | A | -2.1281 | |
| 128 | P | A | -1.7697 | |
| 129 | D | A | -2.4301 | |
| 130 | V | A | -1.7008 | |
| 131 | R | A | -1.0763 | |
| 132 | V | A | -0.0003 | |
| 133 | S | A | 0.0694 | |
| 134 | F | A | 0.1126 | |
| 135 | S | A | -0.2009 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.9075 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.1898 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5331 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2047 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0819 | |
| 157 | D | A | 0.4198 | |
| 158 | L | A | 1.0803 | |
| 159 | A | A | 0.9385 | |
| 160 | A | A | 0.3478 | |
| 161 | P | A | 0.5704 | |
| 162 | C | A | 0.5788 | |
| 163 | P | A | 0.0310 | |
| 164 | G | A | -0.1287 | |
| 165 | L | A | 0.4976 | |
| 166 | P | A | -0.1656 | |
| 167 | P | A | -0.3655 | |
| 168 | G | A | -0.4635 | |
| 169 | A | A | -0.0491 | |
| 170 | C | A | 0.6111 | |
| 171 | P | A | 0.7884 | |
| 172 | P | A | 1.0487 | |
| 173 | I | A | 1.9440 | |
| 174 | Q | A | 0.8910 | |
| 175 | L | A | 1.3032 | |
| 176 | V | A | 0.7593 | |
| 177 | N | A | -0.3575 | |
| 178 | S | A | -0.0124 | |
| 179 | V | A | 0.3807 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.4523 | |
| 182 | D | A | 0.3151 | |
| 183 | G | A | -0.1281 | |
| 184 | D | A | -0.3986 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.3897 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0980 | |
| 190 | F | A | 0.0629 | |
| 191 | G | A | -0.1948 | |
| 192 | N | A | -0.2282 | |
| 193 | M | A | -0.0928 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3593 | |
| 197 | E | A | -2.6686 | |
| 198 | L | A | -1.2700 | |
| 199 | Q | A | -2.5562 | |
| 200 | Q | A | -3.3411 | |
| 201 | D | A | -3.5781 | |
| 202 | R | A | -3.3381 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1289 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3745 | |
| 211 | S | A | -1.8358 | |
| 212 | T | A | -1.2827 | |
| 213 | R | A | -1.7110 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1701 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3035 | |
| 220 | L | A | 0.5607 | |
| 221 | K | A | -1.1980 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8944 | |
| 224 | N | A | -1.6237 | |
| 225 | E | A | -1.2496 | |
| 226 | A | A | -0.6582 | |
| 227 | Y | A | -0.3953 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6490 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1047 | |
| 234 | F | A | 0.1087 | |
| 235 | G | A | -0.7298 | |
| 236 | R | A | -2.2042 | |
| 237 | R | A | -2.5177 | |
| 238 | E | A | -1.5641 | |
| 239 | Q | A | 0.1014 | |
| 240 | V | A | 1.4470 | |
| 241 | Y | A | 0.8792 | |
| 242 | A | A | -0.0195 | |
| 243 | R | A | -1.3462 | |
| 244 | H | A | -0.9160 | |
| 245 | F | A | 0.1073 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.4007 | |
| 249 | A | A | -0.9978 | |
| 250 | G | A | -0.6817 | |
| 251 | P | A | -0.8019 | |
| 252 | V | A | -0.6749 | |
| 253 | G | A | -0.9772 | |
| 254 | H | A | -1.0650 | |
| 255 | P | A | -0.7752 | |
| 256 | L | A | -0.3043 | |
| 257 | P | A | -1.4191 | |
| 258 | D | A | -2.3951 | |
| 259 | D | A | -2.9580 | |
| 260 | P | A | -2.0730 | |
| 261 | P | A | -1.5569 | |
| 262 | P | A | -0.7749 | |
| 263 | S | A | -0.5558 | |
| 264 | P | A | 0.2234 | |
| 265 | L | A | 1.5989 | |
| 266 | Y | A | 1.3975 | |
| 267 | V | A | 1.6636 | |
| 268 | P | A | 0.7017 | |
| 269 | P | A | 0.4574 | |
| 270 | P | A | -0.0275 | |
| 271 | A | A | -0.0764 | |
| 272 | S | A | -0.1477 | |
| 273 | S | A | 0.0988 | |
| 274 | P | A | 0.3575 | |
| 275 | Y | A | 1.1998 | |
| 276 | A | A | 0.5435 | |
| 277 | T | A | 0.5941 | |
| 278 | L | A | 0.8995 | |
| 279 | P | A | 0.3608 | |
| 280 | P | A | 0.0701 | |
| 281 | Y | A | 0.2923 | |
| 282 | D | A | -0.1631 | |
| 283 | Y | A | 1.2142 | |
| 284 | F | A | 0.8744 | |
| 285 | G | A | 0.3158 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.4924 | |
| 291 | L | A | 1.5076 | |
| 292 | V | A | 0.3784 | |
| 293 | S | A | -0.1924 | |
| 294 | S | A | -0.8406 | |
| 295 | D | A | -1.8768 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0823 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6940 | |
| 301 | R | A | -1.9758 | |
| 302 | P | A | -1.0253 | |
| 303 | F | A | -0.1734 | |
| 304 | W | A | -0.3386 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0736 | |
| 307 | R | A | -2.8546 | |
| 308 | A | A | -1.6906 | |
| 309 | Q | A | -1.6223 | |
| 310 | G | A | -1.3528 | |
| 311 | N | A | -1.3039 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7927 | |
| 319 | N | A | -0.8669 | |
| 320 | E | A | -1.0294 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.6408 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.5592 | |
| 333 | N | A | 0.2113 | |
| 334 | F | A | 1.4070 | |
| 335 | T | A | 0.7487 | |
| 336 | I | A | 0.4195 | |
| 337 | S | A | -0.8234 | |
| 338 | Q | A | -1.5038 | |
| 339 | Q | A | -0.9236 | |
| 340 | L | A | 0.6166 | |
| 341 | S | A | -0.0956 | |
| 342 | T | A | -0.7505 | |
| 343 | P | A | -1.3872 | |
| 344 | K | A | -2.5639 | |
| 345 | E | A | -2.6738 | |
| 346 | N | A | -1.5102 | |
| 347 | V | A | 0.6697 | |
| 348 | Y | A | 0.9475 | |
| 349 | D | A | -0.1856 | |
| 350 | P | A | -0.4947 | |
| 351 | S | A | -0.3901 | |
| 352 | N | A | -0.5614 | |
| 353 | F | A | -0.5613 | |
| 354 | K | A | -1.6600 | |
| 355 | N | A | -1.6359 | |
| 356 | Y | A | -0.0761 | |
| 357 | L | A | 0.6789 | |
| 358 | R | A | 0.9311 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1503 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.3706 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9526 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6582 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2739 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.2930 | |
| 376 | L | A | -1.6951 | |
| 377 | D | A | -1.9650 | |
| 378 | P | A | -1.0315 | |
| 379 | G | A | -1.0064 | |
| 380 | V | A | -0.9228 | |
| 381 | L | A | -0.5192 | |
| 382 | A | A | -0.6396 | |
| 383 | H | A | -0.8192 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3604 | |
| 386 | T | A | -0.5598 | |
| 387 | M | A | -0.3247 | |
| 388 | N | A | -0.8593 | |
| 389 | P | A | -1.2280 | |
| 390 | T | A | -1.4757 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4530 | |
| 393 | E | A | -2.8119 | |
| 394 | N | A | -2.1511 | |
| 395 | W | A | -1.4522 | |
| 396 | N | A | -1.3036 | |
| 397 | L | A | -0.2356 | |
| 398 | G | A | 0.5629 | |
| 399 | F | A | 2.3744 | |
| 400 | V | A | 1.7627 | |
| 401 | P | A | 0.0567 | |
| 402 | P | A | -1.8911 | |
| 403 | K | A | -3.2809 | |
| 404 | E | A | -3.8393 | |
| 405 | R | A | -4.0826 | |
| 406 | E | A | -3.8254 | |
| 407 | D | A | -2.8399 | |
| 408 | P | A | -1.7513 | |
| 409 | Y | A | -0.9874 | |
| 410 | K | A | -2.1067 | |
| 411 | G | A | -0.6305 | |
| 412 | L | A | 0.6666 | |
| 413 | I | A | 1.6396 | |
| 414 | F | A | 0.6705 | |
| 415 | W | A | -0.3542 | |
| 416 | E | A | -1.8041 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -3.0097 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0982 | |
| 421 | E | A | -2.7976 | |
| 422 | R | A | -2.3229 | |
| 423 | F | A | -1.2662 | |
| 424 | S | A | -1.5030 | |
| 425 | Q | A | -1.8535 | |
| 426 | D | A | -3.0866 | |
| 427 | L | A | 0.0000 | |
| 428 | D | A | -3.1495 | |
| 429 | Q | A | -2.7991 | |
| 430 | F | A | -1.6600 | |
| 431 | A | A | -1.1575 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.3781 | |
| 435 | K | A | -1.2553 | |
| 436 | F | A | -0.1571 | |
| 437 | L | A | 0.6894 | |
| 438 | Y | A | 0.5919 | |
| 439 | Q | A | -0.4369 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine