Project name: Q11_4

Status: done

Started: 2026-06-26 03:32:06
Settings
Chain sequence(s) A: QQKFQFQFEQQ
C: QQKFQFQFEQQ
B: QQKFQFQFEQQ
D: QQKFQFQFEQQ
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:37)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:38)
Show buried residues

Minimal score value
-3.4642
Maximal score value
1.9919
Average score
-1.063
Total score value
-46.7733

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q A -3.2381
2 Q A -2.4338
3 K A -1.7371
4 F A 0.5360
5 Q A 0.7976
6 F A 1.6953
7 Q A 0.5583
8 F A 0.1800
9 E A -1.9793
10 Q A -2.6784
11 Q A -3.2838
1 Q B -2.7409
2 Q B -2.6677
3 K B -1.6668
4 F B 0.9360
5 Q B 0.3158
6 F B 1.9919
7 Q B 0.4302
8 F B 0.7895
9 E B -1.7380
10 Q B -2.6685
11 Q B -2.7065
1 Q C -2.8018
2 Q C -2.8224
3 K C -2.0268
4 F C 0.8964
5 Q C 0.3977
6 F C 1.8409
7 Q C -0.1048
8 F C 0.1109
9 E C -2.1529
10 Q C -2.9260
11 Q C -2.7951
1 Q D -3.4642
2 Q D -2.8420
3 K D -2.1387
4 F D 0.0016
5 Q D 0.4371
6 F D 1.6584
7 Q D 0.7188
8 F D 0.3491
9 E D -1.9526
10 Q D -2.6288
11 Q D -3.2198
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Laboratory of Theory of Biopolymers 2018