| Chain sequence(s) |
A: QQKFQFQFEQQ
C: QQKFQFQFEQQ B: QQKFQFQFEQQ D: QQKFQFQFEQQ input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:37)
[INFO] Main: Simulation completed successfully. (00:01:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -3.2381 | |
| 2 | Q | A | -2.4338 | |
| 3 | K | A | -1.7371 | |
| 4 | F | A | 0.5360 | |
| 5 | Q | A | 0.7976 | |
| 6 | F | A | 1.6953 | |
| 7 | Q | A | 0.5583 | |
| 8 | F | A | 0.1800 | |
| 9 | E | A | -1.9793 | |
| 10 | Q | A | -2.6784 | |
| 11 | Q | A | -3.2838 | |
| 1 | Q | B | -2.7409 | |
| 2 | Q | B | -2.6677 | |
| 3 | K | B | -1.6668 | |
| 4 | F | B | 0.9360 | |
| 5 | Q | B | 0.3158 | |
| 6 | F | B | 1.9919 | |
| 7 | Q | B | 0.4302 | |
| 8 | F | B | 0.7895 | |
| 9 | E | B | -1.7380 | |
| 10 | Q | B | -2.6685 | |
| 11 | Q | B | -2.7065 | |
| 1 | Q | C | -2.8018 | |
| 2 | Q | C | -2.8224 | |
| 3 | K | C | -2.0268 | |
| 4 | F | C | 0.8964 | |
| 5 | Q | C | 0.3977 | |
| 6 | F | C | 1.8409 | |
| 7 | Q | C | -0.1048 | |
| 8 | F | C | 0.1109 | |
| 9 | E | C | -2.1529 | |
| 10 | Q | C | -2.9260 | |
| 11 | Q | C | -2.7951 | |
| 1 | Q | D | -3.4642 | |
| 2 | Q | D | -2.8420 | |
| 3 | K | D | -2.1387 | |
| 4 | F | D | 0.0016 | |
| 5 | Q | D | 0.4371 | |
| 6 | F | D | 1.6584 | |
| 7 | Q | D | 0.7188 | |
| 8 | F | D | 0.3491 | |
| 9 | E | D | -1.9526 | |
| 10 | Q | D | -2.6288 | |
| 11 | Q | D | -3.2198 |