Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
P: QPPVPPQRPM input PDB |
Selected Chain(s) | A,P |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:09) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:09) [INFO] runJob: Creating pdb object from: input.pdb (00:00:09) [INFO] FoldX: Starting FoldX energy minimalization (00:00:09) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52) [INFO] Main: Simulation completed successfully. (00:00:53) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
5 | S | A | -0.2984 | |
6 | A | A | -0.1041 | |
7 | V | A | 0.0000 | |
8 | K | A | -0.5090 | |
9 | A | A | 0.0000 | |
10 | L | A | 0.4897 | |
11 | F | A | -0.1323 | |
12 | D | A | -1.9426 | |
13 | Y | A | 0.0000 | |
14 | K | A | -1.7037 | |
15 | A | A | -0.5272 | |
16 | Q | A | -1.4092 | |
17 | R | A | -1.7058 | |
18 | E | A | -2.1119 | |
19 | D | A | -0.7591 | |
20 | E | A | 0.0000 | |
21 | L | A | 0.0000 | |
22 | T | A | -0.2461 | |
23 | F | A | 0.0000 | |
24 | T | A | -0.6549 | |
25 | K | A | -1.9122 | |
26 | S | A | -0.4856 | |
27 | A | A | 0.0000 | |
28 | I | A | 1.3035 | |
29 | I | A | 0.0000 | |
30 | Q | A | -0.8704 | |
31 | N | A | -1.0938 | |
32 | V | A | -0.3179 | |
33 | E | A | -1.9261 | |
34 | K | A | -1.7451 | |
35 | Q | A | -1.7587 | |
36 | D | A | -2.1009 | |
37 | G | A | -0.8253 | |
38 | G | A | -0.2021 | |
39 | W | A | 0.0000 | |
40 | W | A | -0.0702 | |
41 | R | A | -0.5407 | |
42 | G | A | 0.0000 | |
43 | D | A | -0.4527 | |
44 | Y | A | 0.2405 | |
45 | G | A | -0.4840 | |
46 | G | A | -0.6743 | |
47 | K | A | -1.0672 | |
48 | K | A | -1.9120 | |
49 | Q | A | -0.6532 | |
50 | L | A | 0.1758 | |
51 | W | A | 0.1730 | |
52 | F | A | 0.0000 | |
53 | P | A | 0.0000 | |
54 | S | A | -0.1529 | |
55 | N | A | -0.6529 | |
56 | Y | A | 0.0000 | |
57 | V | A | 0.0000 | |
58 | E | A | -1.7099 | |
59 | E | A | -2.0696 | |
1 | Q | P | -1.2441 | |
2 | P | P | -0.4807 | |
3 | P | P | 0.2228 | |
4 | V | P | 1.7550 | |
5 | P | P | 0.2622 | |
6 | P | P | -0.3364 | |
7 | Q | P | -1.2681 | |
8 | R | P | -0.5356 | |
9 | P | P | -0.1108 | |
10 | M | P | 1.0067 |