| Chain sequence(s) |
A: GCAGKSCNILGSDPCDAGCFCLPVGIVAGVCV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:03)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6444 | |
| 2 | C | A | -0.1600 | |
| 3 | A | A | 0.3203 | |
| 4 | G | A | -0.5136 | |
| 5 | K | A | -1.1046 | |
| 6 | S | A | -0.4173 | |
| 7 | C | A | 0.0000 | |
| 8 | N | A | 1.4224 | |
| 9 | I | A | 2.9552 | |
| 10 | L | A | 1.8394 | |
| 11 | G | A | 0.2764 | |
| 12 | S | A | -0.4296 | |
| 13 | D | A | -1.3754 | |
| 14 | P | A | -0.2092 | |
| 15 | C | A | -0.1123 | |
| 16 | D | A | -0.9463 | |
| 17 | A | A | -0.3314 | |
| 18 | G | A | -0.0116 | |
| 19 | C | A | 1.0523 | |
| 20 | F | A | 2.6311 | |
| 21 | C | A | 2.0055 | |
| 22 | L | A | 2.4385 | |
| 23 | P | A | 2.3626 | |
| 24 | V | A | 2.4757 | |
| 25 | G | A | 1.8190 | |
| 26 | I | A | 2.5854 | |
| 27 | V | A | 2.5709 | |
| 28 | A | A | 1.7941 | |
| 29 | G | A | 0.0000 | |
| 30 | V | A | 1.3589 | |
| 31 | C | A | 0.0000 | |
| 32 | V | A | 1.8718 |