Project name: query_structure

Status: done

Started: 2026-03-16 20:11:14
Settings
Chain sequence(s) A: GCAGKSCNILGSDPCDAGCFCLPVGIVAGVCV
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:03)
Show buried residues

Minimal score value
-1.3754
Maximal score value
2.9552
Average score
0.7976
Total score value
25.5238

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.6444
2 C A -0.1600
3 A A 0.3203
4 G A -0.5136
5 K A -1.1046
6 S A -0.4173
7 C A 0.0000
8 N A 1.4224
9 I A 2.9552
10 L A 1.8394
11 G A 0.2764
12 S A -0.4296
13 D A -1.3754
14 P A -0.2092
15 C A -0.1123
16 D A -0.9463
17 A A -0.3314
18 G A -0.0116
19 C A 1.0523
20 F A 2.6311
21 C A 2.0055
22 L A 2.4385
23 P A 2.3626
24 V A 2.4757
25 G A 1.8190
26 I A 2.5854
27 V A 2.5709
28 A A 1.7941
29 G A 0.0000
30 V A 1.3589
31 C A 0.0000
32 V A 1.8718
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Laboratory of Theory of Biopolymers 2018