| Chain sequence(s) |
A: GPYCQKWMQTCDSERKCCEGMVCRLWCKKKLL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.3286 | |
| 2 | P | A | 0.1304 | |
| 3 | Y | A | 1.1013 | |
| 4 | C | A | 0.1390 | |
| 5 | Q | A | -1.0096 | |
| 6 | K | A | -0.9877 | |
| 7 | W | A | 0.8779 | |
| 8 | M | A | 0.8018 | |
| 9 | Q | A | 0.0342 | |
| 10 | T | A | -0.0436 | |
| 11 | C | A | -1.1924 | |
| 12 | D | A | -2.7818 | |
| 13 | S | A | -2.2360 | |
| 14 | E | A | -3.2656 | |
| 15 | R | A | -3.0590 | |
| 16 | K | A | -2.9612 | |
| 17 | C | A | -1.7751 | |
| 18 | C | A | -1.4002 | |
| 19 | E | A | -2.4442 | |
| 20 | G | A | -1.5803 | |
| 21 | M | A | -1.2500 | |
| 22 | V | A | -0.5241 | |
| 23 | C | A | -0.7713 | |
| 24 | R | A | -0.8831 | |
| 25 | L | A | 0.7247 | |
| 26 | W | A | 0.3687 | |
| 27 | C | A | 0.0000 | |
| 28 | K | A | -1.8750 | |
| 29 | K | A | -2.3993 | |
| 30 | K | A | -1.4652 | |
| 31 | L | A | 1.0438 | |
| 32 | L | A | 1.7786 |