Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
P: QPPVPPQRPM input PDB |
Selected Chain(s) | A,P |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:08) [INFO] Main: Simulation completed successfully. (00:01:09) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
5 | S | A | -1.6279 | |
6 | A | A | -1.5233 | |
7 | V | A | 0.0000 | |
8 | K | A | -2.2094 | |
9 | A | A | 0.0000 | |
10 | L | A | -1.3687 | |
11 | F | A | -1.8040 | |
12 | D | A | -2.7488 | |
13 | Y | A | 0.0000 | |
14 | K | A | -2.6149 | |
15 | A | A | -2.3405 | |
16 | Q | A | -2.8886 | |
17 | R | A | -3.6401 | |
18 | E | A | -3.1294 | |
19 | D | A | -2.3220 | |
20 | E | A | 0.0000 | |
21 | L | A | 0.0000 | |
22 | T | A | -1.2318 | |
23 | F | A | 0.0000 | |
24 | T | A | -1.8619 | |
25 | K | A | -2.3377 | |
26 | S | A | -1.4300 | |
27 | A | A | 0.0000 | |
28 | I | A | -0.0069 | |
29 | I | A | 0.0000 | |
30 | Q | A | -1.7964 | |
31 | N | A | -2.6345 | |
32 | V | A | -2.3723 | |
33 | E | A | -3.1362 | |
34 | K | A | -3.3580 | |
35 | Q | A | -2.6883 | |
36 | D | A | -2.5899 | |
37 | G | A | -1.8800 | |
38 | G | A | -1.4605 | |
39 | W | A | 0.0000 | |
40 | W | A | -1.7193 | |
41 | R | A | -2.0171 | |
42 | G | A | 0.0000 | |
43 | D | A | -1.8634 | |
44 | Y | A | -0.8429 | |
45 | G | A | -0.8809 | |
46 | G | A | -1.3496 | |
47 | K | A | -1.8345 | |
48 | K | A | -2.6339 | |
49 | Q | A | -1.9477 | |
50 | L | A | -1.1715 | |
51 | W | A | -0.9721 | |
52 | F | A | 0.0000 | |
53 | P | A | 0.0000 | |
54 | S | A | -1.2308 | |
55 | N | A | -0.6838 | |
56 | Y | A | 0.0000 | |
57 | V | A | 0.0000 | |
58 | E | A | -3.0358 | |
59 | E | A | -2.9297 | |
1 | Q | P | -1.0766 | |
2 | P | P | -0.6617 | |
3 | P | P | 0.2761 | |
4 | V | P | 1.1699 | |
5 | P | P | 0.1379 | |
6 | P | P | -0.5856 | |
7 | Q | P | -1.1703 | |
8 | R | P | -1.1439 | |
9 | P | P | -0.2260 | |
10 | M | P | 0.7177 |