| Chain sequence(s) |
A: GPLALNPEPPLLPTSDYVTETDLLYVAETDLLTKTGNPTKDIVVNGKVLVPKVNAYDYKVFLLKLPDPNKMPLPSEDFLNPETEIRIWVLKAIKIEKGGPLGKGTYGHPNFNRLGDVTNPTEYQHETADDRVNLSWTPKLLQEYIIGDRPPIGKYTAPAAPAPGLPPGARRPLEVRLDYVEDGDMADIGFGARDFAALDPEKDNVPDIIRDTVTKVFDYEGMAAEPTGRRMFTYDRYEKSYDSERYRRCGPDLEPLPADPPPSPLYTPPPPDSPFATLPSYRLFTLPDAGEIKEEDLLFNKPIFLEKAKGLNNFVLWHNRLYITVVDNTRATVETITTRISTPTNNVYNPADYITTKRYTEEYKISLILQLAIIPLTPETLDRIRRLDPSILVDANLPFIPPVVRPDPLAGKKFIEIDLTNKLSSDLEKSELGREFLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.1657 | |
| 2 | P | A | 0.4787 | |
| 3 | L | A | 1.6062 | |
| 4 | A | A | 1.0012 | |
| 5 | L | A | 1.0234 | |
| 6 | N | A | -0.9501 | |
| 7 | P | A | -1.4187 | |
| 8 | E | A | -2.1413 | |
| 9 | P | A | -1.3171 | |
| 10 | P | A | -0.4735 | |
| 11 | L | A | 0.2824 | |
| 12 | L | A | 0.3365 | |
| 13 | P | A | -0.1712 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.2996 | |
| 16 | D | A | -1.7054 | |
| 17 | Y | A | -1.0938 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.8307 | |
| 20 | E | A | -1.4254 | |
| 21 | T | A | -1.1579 | |
| 22 | D | A | -1.8527 | |
| 23 | L | A | -0.7039 | |
| 24 | L | A | -0.3200 | |
| 25 | Y | A | -0.1670 | |
| 26 | V | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.9973 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2957 | |
| 31 | L | A | 0.3414 | |
| 32 | L | A | -0.0873 | |
| 33 | T | A | -0.5926 | |
| 34 | K | A | -1.2408 | |
| 35 | T | A | -0.8088 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | -1.4902 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.6080 | |
| 40 | K | A | -2.0123 | |
| 41 | D | A | -0.7696 | |
| 42 | I | A | 1.2677 | |
| 43 | V | A | 2.2578 | |
| 44 | V | A | 1.6864 | |
| 45 | N | A | -0.5316 | |
| 46 | G | A | -0.3694 | |
| 47 | K | A | -0.1244 | |
| 48 | V | A | 1.9756 | |
| 49 | L | A | 2.5057 | |
| 50 | V | A | 1.1915 | |
| 51 | P | A | -0.1300 | |
| 52 | K | A | -1.2741 | |
| 53 | V | A | 0.0000 | |
| 54 | N | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | L | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.0329 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3560 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.4874 | |
| 70 | K | A | -1.9344 | |
| 71 | M | A | -0.9041 | |
| 72 | P | A | -0.7391 | |
| 73 | L | A | -0.5455 | |
| 74 | P | A | -0.6304 | |
| 75 | S | A | -1.3202 | |
| 76 | E | A | -2.5351 | |
| 77 | D | A | -2.3345 | |
| 78 | F | A | -0.7130 | |
| 79 | L | A | -1.1351 | |
| 80 | N | A | -2.0512 | |
| 81 | P | A | -1.6528 | |
| 82 | E | A | -2.3857 | |
| 83 | T | A | -1.4684 | |
| 84 | E | A | -1.1777 | |
| 85 | I | A | 0.0000 | |
| 86 | R | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | V | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.6235 | |
| 92 | A | A | 0.0000 | |
| 93 | I | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | E | A | -1.0074 | |
| 97 | K | A | 0.0000 | |
| 98 | G | A | -0.5666 | |
| 99 | G | A | -0.6181 | |
| 100 | P | A | -0.3019 | |
| 101 | L | A | -0.1648 | |
| 102 | G | A | -0.4280 | |
| 103 | K | A | -0.9334 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.2992 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.7267 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.3934 | |
| 110 | N | A | -2.2283 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -1.2431 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3715 | |
| 117 | V | A | -0.6623 | |
| 118 | T | A | -1.2582 | |
| 119 | N | A | -1.9215 | |
| 120 | P | A | -1.4820 | |
| 121 | T | A | -1.3871 | |
| 122 | E | A | -2.0981 | |
| 123 | Y | A | -0.5968 | |
| 124 | Q | A | -1.1373 | |
| 125 | H | A | -1.3734 | |
| 126 | E | A | -1.8879 | |
| 127 | T | A | -1.5285 | |
| 128 | A | A | -1.2590 | |
| 129 | D | A | -2.5438 | |
| 130 | D | A | -2.1694 | |
| 131 | R | A | -2.3493 | |
| 132 | V | A | -1.4616 | |
| 133 | N | A | -1.7015 | |
| 134 | L | A | -0.8873 | |
| 135 | S | A | -0.4829 | |
| 136 | W | A | 0.0000 | |
| 137 | T | A | -0.4673 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | R | A | -0.6640 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | 0.2978 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | 0.2568 | |
| 155 | Y | A | 0.1280 | |
| 156 | T | A | 0.5666 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | 0.0000 | |
| 159 | A | A | -0.1129 | |
| 160 | A | A | -0.1582 | |
| 161 | P | A | -0.6575 | |
| 162 | A | A | -0.2731 | |
| 163 | P | A | -0.3739 | |
| 164 | G | A | -0.4195 | |
| 165 | L | A | -0.3483 | |
| 166 | P | A | -0.6030 | |
| 167 | P | A | -0.7500 | |
| 168 | G | A | -1.1200 | |
| 169 | A | A | -1.3789 | |
| 170 | R | A | -2.0080 | |
| 171 | R | A | -1.4201 | |
| 172 | P | A | -0.5030 | |
| 173 | L | A | 0.8986 | |
| 174 | E | A | 0.6093 | |
| 175 | V | A | 1.5362 | |
| 176 | R | A | 0.5496 | |
| 177 | L | A | 1.1551 | |
| 178 | D | A | 0.0893 | |
| 179 | Y | A | -0.1145 | |
| 180 | V | A | 0.0000 | |
| 181 | E | A | -1.0964 | |
| 182 | D | A | -1.2274 | |
| 183 | G | A | -0.9151 | |
| 184 | D | A | -0.6818 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.2133 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.4688 | |
| 190 | F | A | -0.1572 | |
| 191 | G | A | -0.3715 | |
| 192 | A | A | -0.1813 | |
| 193 | R | A | -0.3119 | |
| 194 | D | A | -0.5831 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -1.0860 | |
| 197 | A | A | -0.4855 | |
| 198 | L | A | -0.2043 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -1.6487 | |
| 201 | E | A | -2.5632 | |
| 202 | K | A | -2.7598 | |
| 203 | D | A | 0.0000 | |
| 204 | N | A | -1.4265 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.5843 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -1.9551 | |
| 211 | D | A | -1.8902 | |
| 212 | T | A | -0.9352 | |
| 213 | V | A | -0.2931 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.2016 | |
| 217 | F | A | 0.0000 | |
| 218 | D | A | -0.5239 | |
| 219 | Y | A | -0.8269 | |
| 220 | E | A | -1.9199 | |
| 221 | G | A | -1.0593 | |
| 222 | M | A | 0.0000 | |
| 223 | A | A | -1.1420 | |
| 224 | A | A | -0.7165 | |
| 225 | E | A | -0.7142 | |
| 226 | P | A | -0.1606 | |
| 227 | T | A | -0.1372 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.4373 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.7290 | |
| 234 | Y | A | -0.4157 | |
| 235 | D | A | -0.9282 | |
| 236 | R | A | -1.1922 | |
| 237 | Y | A | -0.9096 | |
| 238 | E | A | -1.4184 | |
| 239 | K | A | -1.0469 | |
| 240 | S | A | -0.9984 | |
| 241 | Y | A | -0.7399 | |
| 242 | D | A | -2.0358 | |
| 243 | S | A | -1.5585 | |
| 244 | E | A | -2.0783 | |
| 245 | R | A | -1.7978 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | C | A | -0.8817 | |
| 250 | G | A | -0.4568 | |
| 251 | P | A | -0.4753 | |
| 252 | D | A | -0.4426 | |
| 253 | L | A | 0.1503 | |
| 254 | E | A | -1.2926 | |
| 255 | P | A | -0.5356 | |
| 256 | L | A | 0.1834 | |
| 257 | P | A | -0.6028 | |
| 258 | A | A | -0.7143 | |
| 259 | D | A | -1.9958 | |
| 260 | P | A | -1.3406 | |
| 261 | P | A | -0.8373 | |
| 262 | P | A | -0.5960 | |
| 263 | S | A | 0.0000 | |
| 264 | P | A | 0.2604 | |
| 265 | L | A | 1.5709 | |
| 266 | Y | A | 0.9353 | |
| 267 | T | A | 0.1434 | |
| 268 | P | A | 0.1028 | |
| 269 | P | A | -0.1388 | |
| 270 | P | A | -0.7950 | |
| 271 | P | A | -1.1068 | |
| 272 | D | A | -1.8576 | |
| 273 | S | A | -0.7420 | |
| 274 | P | A | -0.1226 | |
| 275 | F | A | 0.8779 | |
| 276 | A | A | 0.0918 | |
| 277 | T | A | 0.1912 | |
| 278 | L | A | 0.9700 | |
| 279 | P | A | 0.1502 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.9247 | |
| 282 | R | A | 0.5110 | |
| 283 | L | A | 1.3214 | |
| 284 | F | A | 0.2670 | |
| 285 | T | A | -0.7247 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.1549 | |
| 289 | A | A | 0.0000 | |
| 290 | G | A | -1.3713 | |
| 291 | E | A | -2.3113 | |
| 292 | I | A | -1.9203 | |
| 293 | K | A | -2.9320 | |
| 294 | E | A | -3.3345 | |
| 295 | E | A | -3.1470 | |
| 296 | D | A | -2.1277 | |
| 297 | L | A | -1.4179 | |
| 298 | L | A | -0.9420 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3565 | |
| 301 | K | A | -1.4983 | |
| 302 | P | A | -0.8073 | |
| 303 | I | A | -0.1186 | |
| 304 | F | A | -0.5368 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.7924 | |
| 307 | K | A | -3.0442 | |
| 308 | A | A | 0.0000 | |
| 309 | K | A | -2.2585 | |
| 310 | G | A | -1.2154 | |
| 311 | L | A | -0.3594 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | -1.4766 | |
| 314 | F | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -1.0058 | |
| 319 | N | A | -1.0832 | |
| 320 | R | A | -1.4006 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3302 | |
| 331 | A | A | 0.0000 | |
| 332 | T | A | -0.6957 | |
| 333 | V | A | -1.1209 | |
| 334 | E | A | -2.0037 | |
| 335 | T | A | -1.0367 | |
| 336 | I | A | 0.4510 | |
| 337 | T | A | 0.4218 | |
| 338 | T | A | 0.3266 | |
| 339 | R | A | -0.6564 | |
| 340 | I | A | 1.3095 | |
| 341 | S | A | -0.0126 | |
| 342 | T | A | -0.4886 | |
| 343 | P | A | -0.7860 | |
| 344 | T | A | -0.8148 | |
| 345 | N | A | -1.2959 | |
| 346 | N | A | -0.8816 | |
| 347 | V | A | 1.1344 | |
| 348 | Y | A | 1.1040 | |
| 349 | N | A | -0.3484 | |
| 350 | P | A | -0.4014 | |
| 351 | A | A | -0.0211 | |
| 352 | D | A | -0.2927 | |
| 353 | Y | A | 0.7121 | |
| 354 | I | A | 1.9829 | |
| 355 | T | A | 0.6015 | |
| 356 | T | A | -0.4288 | |
| 357 | K | A | -2.0384 | |
| 358 | R | A | -1.5625 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.9038 | |
| 361 | E | A | 0.0000 | |
| 362 | E | A | -0.7061 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.8988 | |
| 365 | I | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | L | A | 0.0000 | |
| 370 | Q | A | -0.5343 | |
| 371 | L | A | 0.0000 | |
| 372 | A | A | 0.0000 | |
| 373 | I | A | -0.0670 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.6840 | |
| 376 | L | A | -0.7760 | |
| 377 | T | A | -0.9386 | |
| 378 | P | A | -1.4670 | |
| 379 | E | A | -2.5794 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.8171 | |
| 382 | D | A | -2.9645 | |
| 383 | R | A | -2.2974 | |
| 384 | I | A | 0.0000 | |
| 385 | R | A | -3.1159 | |
| 386 | R | A | -2.2517 | |
| 387 | L | A | -1.2259 | |
| 388 | D | A | -1.1601 | |
| 389 | P | A | -1.6405 | |
| 390 | S | A | -0.5483 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.3536 | |
| 394 | D | A | -1.4221 | |
| 395 | A | A | -1.2455 | |
| 396 | N | A | -1.4145 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.1458 | |
| 399 | F | A | 1.7334 | |
| 400 | I | A | 0.9350 | |
| 401 | P | A | 0.7261 | |
| 402 | P | A | 0.7101 | |
| 403 | V | A | 2.1739 | |
| 404 | V | A | 2.0172 | |
| 405 | R | A | 0.1712 | |
| 406 | P | A | -0.5719 | |
| 407 | D | A | -1.3738 | |
| 408 | P | A | -1.0079 | |
| 409 | L | A | -0.8646 | |
| 410 | A | A | -1.0002 | |
| 411 | G | A | -1.2183 | |
| 412 | K | A | -1.6293 | |
| 413 | K | A | -2.2734 | |
| 414 | F | A | -1.2451 | |
| 415 | I | A | -0.9349 | |
| 416 | E | A | -2.3008 | |
| 417 | I | A | 0.0000 | |
| 418 | D | A | -2.7981 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5408 | |
| 421 | N | A | -1.8335 | |
| 422 | K | A | -1.7199 | |
| 423 | L | A | -0.6475 | |
| 424 | S | A | -1.0256 | |
| 425 | S | A | -0.8247 | |
| 426 | D | A | -1.9665 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.5482 | |
| 429 | K | A | -3.4354 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.6234 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -3.4064 | |
| 435 | E | A | -2.1920 | |
| 436 | F | A | -1.1930 | |
| 437 | L | A | -0.8325 | |
| 438 | N | A | -2.0763 | |
| 439 | R | A | -2.2545 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine