| Chain sequence(s) |
A: NFMLTQPHSVSESPGKTVIISCTGSSGSIATNYVQWYQQRPGSAPTLLIFEDRKRPSGVPDRFSGSIDSSSNSASLTISGLRAEDEADYYCQSYDSSNQVFGGGTKLTVL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:40)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.2365 | |
| 2 | F | A | -0.0856 | |
| 3 | M | A | 0.9006 | |
| 4 | L | A | 0.0000 | |
| 5 | T | A | 0.0700 | |
| 6 | Q | A | 0.0000 | |
| 7 | P | A | -0.8912 | |
| 8 | H | A | -1.5359 | |
| 9 | S | A | -1.1762 | |
| 10 | V | A | -0.3632 | |
| 11 | S | A | -0.1629 | |
| 12 | E | A | -0.5335 | |
| 13 | S | A | -0.5859 | |
| 14 | P | A | -1.2033 | |
| 15 | G | A | -1.8172 | |
| 16 | K | A | -2.1311 | |
| 17 | T | A | -0.9290 | |
| 18 | V | A | 0.0000 | |
| 19 | I | A | 1.3171 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | 0.2658 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -0.2960 | |
| 24 | G | A | -0.1045 | |
| 25 | S | A | -0.2273 | |
| 26 | S | A | -0.5274 | |
| 27 | G | A | -0.8151 | |
| 28 | S | A | -0.8184 | |
| 29 | I | A | 0.0000 | |
| 30 | A | A | -0.2540 | |
| 31 | T | A | -0.2655 | |
| 32 | N | A | -0.2360 | |
| 33 | Y | A | 0.5313 | |
| 34 | V | A | 0.0000 | |
| 35 | Q | A | -0.1716 | |
| 36 | W | A | 0.0000 | |
| 37 | Y | A | 0.2683 | |
| 38 | Q | A | 0.0000 | |
| 39 | Q | A | -1.4358 | |
| 40 | R | A | -2.3752 | |
| 41 | P | A | -1.4016 | |
| 42 | G | A | -1.0152 | |
| 43 | S | A | -0.9245 | |
| 44 | A | A | -0.5123 | |
| 45 | P | A | -0.5641 | |
| 46 | T | A | -0.1315 | |
| 47 | L | A | 0.3021 | |
| 48 | L | A | 0.0000 | |
| 49 | I | A | 0.0000 | |
| 50 | F | A | -0.8621 | |
| 51 | E | A | -1.2915 | |
| 52 | D | A | -1.4158 | |
| 53 | R | A | -2.7770 | |
| 54 | K | A | -2.8333 | |
| 55 | R | A | -2.2791 | |
| 56 | P | A | -0.9398 | |
| 57 | S | A | -0.9296 | |
| 58 | G | A | -0.8545 | |
| 59 | V | A | -0.7303 | |
| 60 | P | A | -1.2413 | |
| 61 | D | A | -2.1467 | |
| 62 | R | A | -1.1952 | |
| 63 | F | A | 0.0000 | |
| 64 | S | A | -1.3309 | |
| 65 | G | A | -1.2119 | |
| 66 | S | A | -1.1890 | |
| 67 | I | A | -0.6657 | |
| 68 | D | A | -1.5406 | |
| 69 | S | A | -1.0897 | |
| 70 | S | A | -0.8954 | |
| 71 | S | A | -0.8845 | |
| 72 | N | A | -1.0070 | |
| 73 | S | A | -0.7802 | |
| 74 | A | A | 0.0000 | |
| 75 | S | A | -0.2190 | |
| 76 | L | A | 0.0000 | |
| 77 | T | A | 0.3760 | |
| 78 | I | A | 0.0000 | |
| 79 | S | A | -1.0451 | |
| 80 | G | A | -1.4503 | |
| 81 | L | A | 0.0000 | |
| 82 | R | A | -2.7422 | |
| 83 | A | A | -1.8119 | |
| 84 | E | A | -2.8406 | |
| 85 | D | A | 0.0000 | |
| 86 | E | A | -2.4614 | |
| 87 | A | A | 0.0000 | |
| 88 | D | A | -1.6361 | |
| 89 | Y | A | 0.0000 | |
| 90 | Y | A | 0.2055 | |
| 91 | C | A | 0.0000 | |
| 92 | Q | A | 0.0000 | |
| 93 | S | A | 0.0000 | |
| 94 | Y | A | -0.6273 | |
| 95 | D | A | -1.4345 | |
| 96 | S | A | -1.2532 | |
| 97 | S | A | -1.2311 | |
| 98 | N | A | -2.0342 | |
| 99 | Q | A | -1.4433 | |
| 100 | V | A | -0.0834 | |
| 101 | F | A | 1.1502 | |
| 102 | G | A | 0.6468 | |
| 103 | G | A | -0.3670 | |
| 104 | G | A | -0.6389 | |
| 105 | T | A | 0.0000 | |
| 106 | K | A | -2.0370 | |
| 107 | L | A | 0.0000 | |
| 108 | T | A | -0.7975 | |
| 109 | V | A | -0.4115 | |
| 110 | L | A | 1.0574 |