| Chain sequence(s) |
A: FEFEFEGSKGH
C: FEFEFEGSKGH B: FEFEFEGSKGH D: FEFEFEGSKGH input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | -0.5716 | |
| 2 | E | A | -2.1279 | |
| 3 | F | A | -2.4399 | |
| 4 | E | A | -3.3100 | |
| 5 | F | A | 0.0000 | |
| 6 | E | A | -3.1221 | |
| 7 | G | A | -2.1027 | |
| 8 | S | A | -1.2382 | |
| 9 | K | A | -1.6005 | |
| 10 | G | A | -1.3572 | |
| 11 | H | A | -1.3994 | |
| 1 | F | B | -0.0077 | |
| 2 | E | B | -1.7427 | |
| 3 | F | B | -1.6748 | |
| 4 | E | B | -2.6994 | |
| 5 | F | B | 0.0000 | |
| 6 | E | B | -2.5394 | |
| 7 | G | B | 0.0000 | |
| 8 | S | B | -1.5998 | |
| 9 | K | B | -2.3365 | |
| 10 | G | B | -1.9045 | |
| 11 | H | B | -1.4388 | |
| 1 | F | C | -0.7116 | |
| 2 | E | C | -1.9999 | |
| 3 | F | C | -2.0280 | |
| 4 | E | C | -2.4251 | |
| 5 | F | C | -2.0316 | |
| 6 | E | C | -2.2161 | |
| 7 | G | C | 0.0000 | |
| 8 | S | C | -0.8595 | |
| 9 | K | C | -1.0437 | |
| 10 | G | C | -0.8520 | |
| 11 | H | C | -1.2172 | |
| 1 | F | D | 0.2518 | |
| 2 | E | D | -1.6293 | |
| 3 | F | D | -2.0523 | |
| 4 | E | D | -3.0163 | |
| 5 | F | D | -2.6601 | |
| 6 | E | D | -2.9545 | |
| 7 | G | D | -2.2744 | |
| 8 | S | D | -1.5413 | |
| 9 | K | D | -2.1433 | |
| 10 | G | D | -1.8142 | |
| 11 | H | D | -1.4975 |