| Chain sequence(s) |
L: GTAGAPGGQQAD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 213 | G | L | -0.9486 | |
| 214 | T | L | -0.1442 | |
| 215 | A | L | -0.0383 | |
| 216 | G | L | -0.4450 | |
| 217 | A | L | -0.0723 | |
| 218 | P | L | -0.3287 | |
| 219 | G | L | -0.5977 | |
| 220 | G | L | -0.7696 | |
| 221 | Q | L | -1.5086 | |
| 222 | Q | L | -1.4130 | |
| 223 | A | L | -0.4870 | |
| 224 | D | L | -1.9012 |