Project name: query_structure

Status: done

Started: 2026-03-16 23:18:46
Settings
Chain sequence(s) A: GCLEFWWKCNPNDDKCCRPKLKCSKLFKLCNFSF
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:58)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:59)
Show buried residues

Minimal score value
-3.6274
Maximal score value
2.3983
Average score
-0.8092
Total score value
-27.5138

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.7136
2 C A -0.5514
3 L A -0.4441
4 E A 0.0225
5 F A 1.9197
6 W A 1.8881
7 W A 0.1982
8 K A -1.9112
9 C A 0.0000
10 N A -3.6274
11 P A -2.8580
12 N A -2.8771
13 D A -3.5413
14 D A -3.6119
15 K A -3.4605
16 C A 0.0000
17 C A -1.5520
18 R A -2.8680
19 P A -1.6611
20 K A -1.7152
21 L A -0.7072
22 K A -2.1873
23 C A -1.6324
24 S A -0.6701
25 K A -1.4619
26 L A 1.1756
27 F A 1.2522
28 K A -1.3774
29 L A -0.6265
30 C A 0.0000
31 N A 0.7513
32 F A 1.7266
33 S A 1.2093
34 F A 2.3983
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Laboratory of Theory of Biopolymers 2018