| Chain sequence(s) |
A: GCLEFWWKCNPNDDKCCRPKLKCSKLFKLCNFSF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:58)
[INFO] Main: Simulation completed successfully. (00:00:59)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7136 | |
| 2 | C | A | -0.5514 | |
| 3 | L | A | -0.4441 | |
| 4 | E | A | 0.0225 | |
| 5 | F | A | 1.9197 | |
| 6 | W | A | 1.8881 | |
| 7 | W | A | 0.1982 | |
| 8 | K | A | -1.9112 | |
| 9 | C | A | 0.0000 | |
| 10 | N | A | -3.6274 | |
| 11 | P | A | -2.8580 | |
| 12 | N | A | -2.8771 | |
| 13 | D | A | -3.5413 | |
| 14 | D | A | -3.6119 | |
| 15 | K | A | -3.4605 | |
| 16 | C | A | 0.0000 | |
| 17 | C | A | -1.5520 | |
| 18 | R | A | -2.8680 | |
| 19 | P | A | -1.6611 | |
| 20 | K | A | -1.7152 | |
| 21 | L | A | -0.7072 | |
| 22 | K | A | -2.1873 | |
| 23 | C | A | -1.6324 | |
| 24 | S | A | -0.6701 | |
| 25 | K | A | -1.4619 | |
| 26 | L | A | 1.1756 | |
| 27 | F | A | 1.2522 | |
| 28 | K | A | -1.3774 | |
| 29 | L | A | -0.6265 | |
| 30 | C | A | 0.0000 | |
| 31 | N | A | 0.7513 | |
| 32 | F | A | 1.7266 | |
| 33 | S | A | 1.2093 | |
| 34 | F | A | 2.3983 |