| Chain sequence(s) |
B: SAVEELAKVKDPEVREVALRVAELEAEHYAARAALAAARAAGASGEEIAALEARIEAVNEEAKELAKKAKKPEESKKAVRLVGEAAREDPSADAAIAALEGSGC
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:46)
[INFO] Main: Simulation completed successfully. (00:02:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | -1.1494 | |
| 2 | A | B | 0.0000 | |
| 3 | V | B | -1.6927 | |
| 4 | E | B | -2.6229 | |
| 5 | E | B | -2.5008 | |
| 6 | L | B | 0.0000 | |
| 7 | A | B | -2.4213 | |
| 8 | K | B | -2.9274 | |
| 9 | V | B | -2.8037 | |
| 10 | K | B | -2.6340 | |
| 11 | D | B | -2.5442 | |
| 12 | P | B | -2.1432 | |
| 13 | E | B | -3.2123 | |
| 14 | V | B | 0.0000 | |
| 15 | R | B | -2.6109 | |
| 16 | E | B | -2.7492 | |
| 17 | V | B | -2.1642 | |
| 18 | A | B | 0.0000 | |
| 19 | L | B | -1.3821 | |
| 20 | R | B | -1.4573 | |
| 21 | V | B | 0.0000 | |
| 22 | A | B | 0.0000 | |
| 23 | E | B | -1.6593 | |
| 24 | L | B | 0.0000 | |
| 25 | E | B | -1.3743 | |
| 26 | A | B | -1.4187 | |
| 27 | E | B | -1.4137 | |
| 28 | H | B | -1.4556 | |
| 29 | Y | B | -0.2685 | |
| 30 | A | B | -0.4536 | |
| 31 | A | B | 0.0000 | |
| 32 | R | B | -1.8701 | |
| 33 | A | B | -0.8257 | |
| 34 | A | B | -0.6943 | |
| 35 | L | B | 0.0000 | |
| 36 | A | B | -0.9475 | |
| 37 | A | B | -0.7448 | |
| 38 | A | B | -1.3841 | |
| 39 | R | B | -2.0963 | |
| 40 | A | B | -0.9323 | |
| 41 | A | B | -0.7320 | |
| 42 | G | B | -1.2551 | |
| 43 | A | B | -1.5141 | |
| 44 | S | B | -1.7869 | |
| 45 | G | B | -2.1065 | |
| 46 | E | B | -2.7468 | |
| 47 | E | B | -3.0127 | |
| 48 | I | B | -1.8397 | |
| 49 | A | B | -1.5916 | |
| 50 | A | B | -1.7004 | |
| 51 | L | B | -1.8514 | |
| 52 | E | B | -2.4380 | |
| 53 | A | B | -1.6933 | |
| 54 | R | B | -2.6415 | |
| 55 | I | B | -2.4765 | |
| 56 | E | B | -3.2221 | |
| 57 | A | B | -2.6074 | |
| 58 | V | B | 0.0000 | |
| 59 | N | B | -3.3255 | |
| 60 | E | B | -4.0679 | |
| 61 | E | B | -3.3661 | |
| 62 | A | B | -3.0701 | |
| 63 | K | B | -4.1826 | |
| 64 | E | B | -4.3582 | |
| 65 | L | B | -3.1442 | |
| 66 | A | B | -3.2567 | |
| 67 | K | B | -3.8239 | |
| 68 | K | B | -3.7466 | |
| 69 | A | B | -3.8060 | |
| 70 | K | B | -3.6608 | |
| 71 | K | B | -3.8566 | |
| 72 | P | B | -3.7019 | |
| 73 | E | B | -4.1463 | |
| 74 | E | B | -4.5115 | |
| 75 | S | B | 0.0000 | |
| 76 | K | B | -3.9354 | |
| 77 | K | B | -3.6372 | |
| 78 | A | B | 0.0000 | |
| 79 | V | B | -2.0715 | |
| 80 | R | B | -2.9568 | |
| 81 | L | B | -2.2038 | |
| 82 | V | B | 0.0000 | |
| 83 | G | B | -2.0782 | |
| 84 | E | B | -2.7176 | |
| 85 | A | B | 0.0000 | |
| 86 | A | B | -2.6551 | |
| 87 | R | B | -3.3720 | |
| 88 | E | B | -3.2401 | |
| 89 | D | B | -2.4876 | |
| 90 | P | B | -1.8577 | |
| 91 | S | B | -1.5532 | |
| 92 | A | B | 0.0000 | |
| 93 | D | B | -1.8904 | |
| 94 | A | B | -1.3740 | |
| 95 | A | B | 0.0000 | |
| 96 | I | B | -1.0478 | |
| 97 | A | B | -0.9961 | |
| 98 | A | B | -1.5675 | |
| 99 | L | B | 0.0000 | |
| 100 | E | B | -2.1980 | |
| 101 | G | B | -1.3225 | |
| 102 | S | B | -1.4992 | |
| 103 | G | B | -1.0480 | |
| 104 | C | B | 0.0490 |