Project name: query_structure

Status: done

Started: 2026-03-16 23:21:12
Settings
Chain sequence(s) A: LEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPK
D: GGSGSSVSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAYDTFFPGYEPNSPISINYRT
input PDB
Selected Chain(s) A,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:53)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:55)
Show buried residues

Minimal score value
-2.6482
Maximal score value
1.5405
Average score
-0.6727
Total score value
-135.2042

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
141 L A 0.0014
142 E A -2.1029
143 K A -2.2165
144 H A -1.4155
145 S A 0.0000
146 W A 0.0000
147 Y A 0.0000
148 H A -0.9474
149 G A 0.0000
150 P A -1.3574
151 V A -1.2425
152 S A -2.0226
153 R A -2.6254
154 N A -1.8451
155 A A -0.6838
156 A A 0.0000
157 E A -0.7138
158 Y A 0.7991
159 L A 0.6150
160 L A 0.0000
161 S A 0.1679
162 S A 0.1961
163 G A 0.4945
164 I A 0.3326
165 N A -0.5835
166 G A 0.0000
167 S A 0.0000
168 F A 0.0000
169 L A 0.0000
170 V A 0.0000
171 R A 0.0000
172 E A -1.9263
173 S A -2.2861
174 E A -2.6482
175 S A -1.5898
176 S A -1.3040
177 P A -1.5091
178 G A -1.4255
179 Q A -2.1841
180 R A -2.0910
181 S A 0.0000
182 I A 0.0000
183 S A 0.0000
184 L A 0.0000
185 R A -0.8700
186 Y A -0.9981
187 E A -2.2689
188 G A -2.0633
189 R A -2.4028
190 V A -0.9329
191 Y A -0.1327
192 H A -0.8695
193 Y A -0.8199
194 R A -2.1506
195 I A 0.0000
196 N A -1.9856
197 T A -1.7368
198 A A -1.4224
199 S A -1.4843
200 D A -2.4433
201 G A -2.1098
202 K A -2.1965
203 L A -1.2877
204 Y A -1.1830
205 V A -0.7701
206 S A -1.0296
207 S A -1.3774
208 E A -2.2122
209 S A -1.4519
210 R A -1.7562
211 F A -0.9891
212 N A -1.8338
213 T A -0.8397
214 L A -0.1884
215 A A 0.1026
216 E A -0.3913
217 L A 0.0000
218 V A 0.0000
219 H A 0.1985
220 H A -0.0268
221 H A 0.0000
222 S A 0.1480
223 T A 0.3866
224 V A 0.6747
225 A A 0.3169
226 D A -0.5434
227 G A -0.5081
228 L A 0.0000
229 I A 0.8314
230 T A 0.3049
231 T A 0.1894
232 L A 0.0000
233 H A -0.3629
234 Y A 0.2116
235 P A 0.0000
236 A A 0.0000
237 P A -0.4000
238 K A -1.6138
1 G D -0.3789
2 G D -0.7563
3 S D -0.7634
4 G D -0.7691
5 S D -0.4977
6 S D 0.1416
7 V D 1.3754
8 S D 0.8569
9 S D 0.8446
10 V D 1.5405
11 P D 0.1238
12 T D -1.0603
13 K D -2.0609
14 L D 0.0000
15 E D -2.1041
16 V D -0.2918
17 V D 0.4352
18 D D -0.7667
19 A D -0.6444
20 T D -0.5664
21 P D -1.0788
22 T D -1.2069
23 S D -1.1948
24 L D 0.0000
25 K D -0.7851
26 I D 0.0000
27 S D -1.1585
28 W D 0.0000
29 D D -2.0529
30 A D -1.2621
31 Y D -0.6767
32 Y D 0.0000
33 S D -0.9425
34 S D -0.6713
35 W D -0.5082
36 Q D -1.7050
37 N D -1.9301
38 V D 0.0000
39 K D 0.0000
40 Y D 0.0000
41 Y D 0.0000
42 R D -0.5729
43 I D 0.0000
44 T D -0.6399
45 Y D 0.0000
46 G D 0.0000
47 E D -1.2993
48 T D -1.0338
49 G D -1.2393
50 G D -1.5659
51 D D -2.0239
52 S D -1.0565
53 P D -0.4149
54 V D 0.3276
55 Q D -1.1814
56 E D -2.0005
57 F D -1.3471
58 T D 0.0000
59 V D 0.0000
60 P D 0.0000
61 G D -0.1354
62 Y D 0.3845
63 Y D 0.5057
64 S D -0.2996
65 T D -0.2935
66 A D 0.0000
67 T D -0.3477
68 I D 0.0000
69 S D -0.8001
70 G D -1.0197
71 L D 0.0000
72 K D -2.2968
73 P D -1.7459
74 G D -1.4296
75 V D -1.0287
76 D D -1.5906
77 Y D 0.0000
78 T D -0.7169
79 I D 0.0000
80 T D -0.3702
81 V D 0.0000
82 Y D -0.3252
83 A D 0.0000
84 Y D 0.0000
85 D D -0.9680
86 T D -0.1066
87 F D 0.0000
88 F D 1.3412
89 P D 0.2985
90 G D -0.3379
91 Y D -0.4737
92 E D -1.9015
93 P D -1.5791
94 N D -1.7482
95 S D -1.0541
96 P D -0.6212
97 I D 0.0000
98 S D -0.5753
99 I D -0.7438
100 N D -1.4381
101 Y D -0.9880
102 R D -2.3270
103 T D -1.5069
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Laboratory of Theory of Biopolymers 2018