| Chain sequence(s) |
A: QVQLQESGGGLVQAGGSLRLSCAASGSSFSNYAWFRQAPGKEREFVAAISYDGDRTRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARAADGYYDSYGFDYWWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:35)
[INFO] Main: Simulation completed successfully. (00:01:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.6427 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.9951 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.7901 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -1.2309 | |
| 8 | G | A | -1.0419 | |
| 9 | G | A | -0.8474 | |
| 10 | G | A | -0.0563 | |
| 11 | L | A | 1.0145 | |
| 12 | V | A | -0.0584 | |
| 13 | Q | A | -1.2870 | |
| 14 | A | A | -1.5733 | |
| 15 | G | A | -1.3928 | |
| 16 | G | A | -1.0397 | |
| 17 | S | A | -1.2087 | |
| 18 | L | A | -1.0087 | |
| 19 | R | A | -2.0609 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.9040 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -1.1524 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.3879 | |
| 26 | G | A | -1.2376 | |
| 27 | S | A | -0.8584 | |
| 28 | S | A | -0.4532 | |
| 29 | F | A | -0.0335 | |
| 30 | S | A | -0.5631 | |
| 31 | N | A | -1.0933 | |
| 32 | Y | A | 0.0000 | |
| 33 | A | A | 0.0000 | |
| 34 | W | A | 0.0000 | |
| 35 | F | A | -0.2781 | |
| 36 | R | A | -1.4398 | |
| 37 | Q | A | -2.4153 | |
| 38 | A | A | -2.2540 | |
| 39 | P | A | -1.5131 | |
| 40 | G | A | -2.0463 | |
| 41 | K | A | -3.6056 | |
| 42 | E | A | -3.8698 | |
| 43 | R | A | -3.2827 | |
| 44 | E | A | -2.3245 | |
| 45 | F | A | 0.1303 | |
| 46 | V | A | 0.1881 | |
| 47 | A | A | 0.0000 | |
| 48 | A | A | 0.0000 | |
| 49 | I | A | 0.2728 | |
| 50 | S | A | 0.0862 | |
| 51 | Y | A | 0.0153 | |
| 52 | D | A | -1.9831 | |
| 53 | G | A | -1.8430 | |
| 54 | D | A | -3.0867 | |
| 55 | R | A | -3.2022 | |
| 56 | T | A | -1.8882 | |
| 57 | R | A | -1.7099 | |
| 58 | F | A | -1.4751 | |
| 59 | T | A | -1.3759 | |
| 60 | I | A | -0.3572 | |
| 61 | S | A | -0.5200 | |
| 62 | R | A | -1.4439 | |
| 63 | D | A | -2.1882 | |
| 64 | N | A | -2.2221 | |
| 65 | A | A | -1.7948 | |
| 66 | K | A | -2.5904 | |
| 67 | N | A | -1.9362 | |
| 68 | T | A | 0.0000 | |
| 69 | L | A | 0.0000 | |
| 70 | Y | A | -0.6393 | |
| 71 | L | A | 0.0000 | |
| 72 | Q | A | -1.2974 | |
| 73 | M | A | 0.0000 | |
| 74 | N | A | -1.4687 | |
| 75 | S | A | -1.1969 | |
| 76 | L | A | 0.0000 | |
| 77 | K | A | -2.6357 | |
| 78 | P | A | -2.0274 | |
| 79 | E | A | -2.3934 | |
| 80 | D | A | 0.0000 | |
| 81 | T | A | -0.9985 | |
| 82 | A | A | 0.0000 | |
| 83 | V | A | -0.6014 | |
| 84 | Y | A | 0.0000 | |
| 85 | Y | A | -0.5142 | |
| 86 | C | A | 0.0000 | |
| 87 | A | A | 0.0000 | |
| 88 | R | A | 0.0000 | |
| 89 | A | A | 0.0000 | |
| 90 | A | A | 0.0000 | |
| 91 | D | A | -1.7962 | |
| 92 | G | A | -0.7317 | |
| 93 | Y | A | 0.6146 | |
| 94 | Y | A | 0.8928 | |
| 95 | D | A | -0.1886 | |
| 96 | S | A | 0.2664 | |
| 97 | Y | A | 0.8400 | |
| 98 | G | A | 0.2317 | |
| 99 | F | A | 0.1205 | |
| 100 | D | A | -1.1287 | |
| 101 | Y | A | -0.3817 | |
| 102 | W | A | -0.0972 | |
| 103 | W | A | -0.1470 | |
| 104 | G | A | -0.9151 | |
| 105 | Q | A | -1.5217 | |
| 106 | G | A | -1.0318 | |
| 107 | T | A | -1.1325 | |
| 108 | Q | A | -1.0545 | |
| 109 | V | A | 0.0000 | |
| 110 | T | A | -0.3371 | |
| 111 | V | A | 0.0000 | |
| 112 | S | A | -0.8247 | |
| 113 | S | A | -0.9106 |