| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGLDRPFSSYSWAWFRQAPGQGLEAVAAIGGASGETVYHPAVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAGGGGIGEGHEYWGQGTLVTVS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:13)
[INFO] Main: Simulation completed successfully. (00:01:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.7024 | |
| 2 | V | H | -1.4595 | |
| 3 | Q | H | -1.1941 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.7216 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2248 | |
| 8 | G | H | -0.6614 | |
| 9 | G | H | 0.2368 | |
| 10 | G | H | 0.9158 | |
| 11 | L | H | 1.4555 | |
| 12 | V | H | -0.0663 | |
| 13 | Q | H | -1.4131 | |
| 14 | P | H | -1.8230 | |
| 15 | G | H | -1.6011 | |
| 16 | G | H | -1.0526 | |
| 17 | S | H | -1.1702 | |
| 18 | L | H | -0.6111 | |
| 19 | R | H | -1.5666 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.3235 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2685 | |
| 24 | A | H | -0.4684 | |
| 25 | S | H | -0.9131 | |
| 26 | G | H | -1.5807 | |
| 27 | L | H | -1.7314 | |
| 28 | D | H | -2.6060 | |
| 29 | R | H | -2.3556 | |
| 30 | P | H | -1.5123 | |
| 31 | F | H | 0.0000 | |
| 32 | S | H | -0.9540 | |
| 33 | S | H | -1.0942 | |
| 34 | Y | H | 0.0000 | |
| 35 | S | H | -0.7750 | |
| 36 | W | H | 0.0000 | |
| 37 | A | H | 0.3988 | |
| 38 | W | H | 0.0000 | |
| 39 | F | H | 0.5974 | |
| 40 | R | H | 0.0000 | |
| 41 | Q | H | -0.3172 | |
| 42 | A | H | -0.8492 | |
| 43 | P | H | -0.9847 | |
| 44 | G | H | -1.2174 | |
| 45 | Q | H | -1.6388 | |
| 46 | G | H | -0.7935 | |
| 47 | L | H | 0.5562 | |
| 48 | E | H | -0.2007 | |
| 49 | A | H | 0.1478 | |
| 50 | V | H | 0.0000 | |
| 51 | A | H | 0.0000 | |
| 52 | A | H | 0.2779 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | -0.6694 | |
| 55 | G | H | -0.7161 | |
| 56 | A | H | -0.5546 | |
| 57 | S | H | -0.9520 | |
| 58 | G | H | -1.1035 | |
| 59 | E | H | -1.6393 | |
| 60 | T | H | -0.1315 | |
| 61 | V | H | 1.0708 | |
| 62 | Y | H | 0.2064 | |
| 63 | H | H | -0.4966 | |
| 64 | P | H | -0.7778 | |
| 65 | A | H | -0.9149 | |
| 66 | V | H | 0.0000 | |
| 67 | K | H | -1.8664 | |
| 68 | G | H | -1.5876 | |
| 69 | R | H | -1.3778 | |
| 70 | F | H | 0.0000 | |
| 71 | T | H | -0.6034 | |
| 72 | I | H | 0.0000 | |
| 73 | S | H | -0.6799 | |
| 74 | R | H | -1.2137 | |
| 75 | D | H | -1.8666 | |
| 76 | N | H | -2.1072 | |
| 77 | S | H | -1.8461 | |
| 78 | K | H | -2.5411 | |
| 79 | N | H | -1.9439 | |
| 80 | T | H | -1.1770 | |
| 81 | L | H | 0.0000 | |
| 82 | Y | H | -0.5166 | |
| 83 | L | H | 0.0000 | |
| 84 | Q | H | -0.9972 | |
| 85 | M | H | 0.0000 | |
| 86 | N | H | -1.4349 | |
| 87 | S | H | -1.4495 | |
| 88 | L | H | 0.0000 | |
| 89 | R | H | -2.9574 | |
| 90 | A | H | -2.0526 | |
| 91 | E | H | -2.4359 | |
| 92 | D | H | 0.0000 | |
| 93 | T | H | -0.5302 | |
| 94 | A | H | 0.0000 | |
| 95 | V | H | 0.9376 | |
| 96 | Y | H | 0.0000 | |
| 97 | Y | H | 0.5887 | |
| 98 | C | H | 0.0000 | |
| 99 | A | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | G | H | -1.7019 | |
| 102 | G | H | -1.6780 | |
| 103 | G | H | -1.6594 | |
| 104 | G | H | -0.3278 | |
| 105 | I | H | 1.0015 | |
| 106 | G | H | -0.8242 | |
| 107 | E | H | -2.4862 | |
| 108 | G | H | -2.1794 | |
| 109 | H | H | -2.3569 | |
| 110 | E | H | -2.4460 | |
| 111 | Y | H | -0.9210 | |
| 112 | W | H | 0.0182 | |
| 113 | G | H | -0.0654 | |
| 114 | Q | H | -0.8861 | |
| 115 | G | H | 0.1161 | |
| 116 | T | H | 0.5688 | |
| 117 | L | H | 1.6597 | |
| 118 | V | H | 0.0000 | |
| 119 | T | H | 0.2989 | |
| 120 | V | H | 0.0000 | |
| 121 | S | H | -0.6796 |