Project name: query_structure

Status: done

Started: 2026-03-16 21:22:49
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Chain sequence(s) A: MIPRGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVLASTNYYIKVRAGDNKYMHLKVFNGPADRVLTGYQVDKNKDDELTGF
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:05:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:05:07)
Show buried residues

Minimal score value
-4.1546
Maximal score value
2.0349
Average score
-1.0911
Total score value
-102.5603

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.6450
2 I A 1.7611
3 P A 0.4691
4 R A -0.9446
5 G A -0.8269
6 L A -0.5343
7 S A -1.0858
8 E A -2.1938
9 A A -1.7804
10 K A -1.6167
11 P A -0.9608
12 A A -0.9210
13 T A -1.2646
14 P A -1.7558
15 E A -2.8641
16 I A 0.0000
17 Q A -2.6669
18 E A -3.7200
19 I A 0.0000
20 V A 0.0000
21 D A -3.7671
22 K A -2.7508
23 V A 0.0000
24 K A -2.4070
25 P A -2.0411
26 Q A -1.9866
27 L A 0.0000
28 E A -3.0232
29 E A -3.7192
30 K A -3.2371
31 T A -2.5217
32 N A -3.3792
33 E A -3.2740
34 T A -1.9705
35 Y A 0.0000
36 G A -1.7017
37 K A -2.7056
38 L A 0.0000
39 E A -2.3153
40 A A -1.6106
41 V A -0.6032
42 Q A -1.2273
43 Y A 0.0000
44 K A -0.9286
45 T A 0.0329
46 Q A 0.4498
47 V A 2.0349
48 L A 2.0189
49 A A 1.1493
50 S A 0.9808
51 T A 0.9790
52 N A 0.7170
53 Y A 0.1965
54 Y A 0.0000
55 I A 0.0000
56 K A 0.0000
57 V A 0.0000
58 R A -2.8135
59 A A -2.2479
60 G A -2.5494
61 D A -2.9430
62 N A -3.6852
63 K A -3.3905
64 Y A 0.0000
65 M A 0.0000
66 H A 0.0000
67 L A 0.0000
68 K A 0.1358
69 V A 0.0000
70 F A 0.2714
71 N A -0.2354
72 G A -0.6616
73 P A -0.7764
74 A A -0.9616
75 D A -1.8393
76 R A -1.0460
77 V A 0.0524
78 L A 0.0000
79 T A 0.2027
80 G A 0.1685
81 Y A 0.3320
82 Q A -0.1034
83 V A -0.3132
84 D A -2.2582
85 K A -3.1093
86 N A -4.0378
87 K A -4.1546
88 D A -3.8377
89 D A -3.6759
90 E A -3.2312
91 L A 0.0000
92 T A -0.6513
93 G A -0.2153
94 F A 0.8858
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Laboratory of Theory of Biopolymers 2018