| Chain sequence(s) |
A: GPPFARYYNMDMETFDVEFGFPVEPGVEGSGRIVVGETPSGKAASCLYIGPYDEIEKVYDALMKWVRDNGYELSGEAYEIYLDAPAETPPDQLRTQVVLMLKNAGPETETLESQPALLIRTRTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:46)
[INFO] Main: Simulation completed successfully. (00:01:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 28 | G | A | -0.1866 | |
| 29 | P | A | 0.3608 | |
| 30 | P | A | 0.9181 | |
| 31 | F | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | R | A | -0.3520 | |
| 34 | Y | A | -0.0315 | |
| 35 | Y | A | -0.4338 | |
| 36 | N | A | -1.3035 | |
| 37 | M | A | -0.8745 | |
| 38 | D | A | -1.9075 | |
| 39 | M | A | -1.1196 | |
| 40 | E | A | -1.7368 | |
| 41 | T | A | -1.1667 | |
| 42 | F | A | -0.4802 | |
| 43 | D | A | 0.0000 | |
| 44 | V | A | 0.0000 | |
| 45 | E | A | -0.7668 | |
| 46 | F | A | 0.7948 | |
| 47 | G | A | 1.3706 | |
| 48 | F | A | 1.7979 | |
| 49 | P | A | 0.1908 | |
| 50 | V | A | -0.6614 | |
| 51 | E | A | -2.1547 | |
| 52 | P | A | -1.3797 | |
| 53 | G | A | -1.1309 | |
| 54 | V | A | -0.9121 | |
| 55 | E | A | -1.2463 | |
| 56 | G | A | -0.0577 | |
| 57 | S | A | -0.4878 | |
| 58 | G | A | -0.8723 | |
| 59 | R | A | -1.3699 | |
| 60 | I | A | 0.4738 | |
| 61 | V | A | 1.4826 | |
| 62 | V | A | 1.4216 | |
| 63 | G | A | 0.3921 | |
| 64 | E | A | -1.5750 | |
| 65 | T | A | 0.0000 | |
| 66 | P | A | -1.2674 | |
| 67 | S | A | -1.4343 | |
| 68 | G | A | -1.4034 | |
| 69 | K | A | -1.7385 | |
| 70 | A | A | 0.0000 | |
| 71 | A | A | 0.0000 | |
| 72 | S | A | 0.0537 | |
| 73 | C | A | 0.7358 | |
| 74 | L | A | 1.0307 | |
| 75 | Y | A | 0.0000 | |
| 76 | I | A | 0.8840 | |
| 77 | G | A | 0.0000 | |
| 78 | P | A | -1.5846 | |
| 79 | Y | A | -1.3857 | |
| 80 | D | A | -2.9373 | |
| 81 | E | A | -3.1669 | |
| 82 | I | A | -2.3655 | |
| 83 | E | A | -3.7302 | |
| 84 | K | A | -3.6696 | |
| 85 | V | A | 0.0000 | |
| 86 | Y | A | -1.8825 | |
| 87 | D | A | -3.0154 | |
| 88 | A | A | -1.8363 | |
| 89 | L | A | 0.0000 | |
| 90 | M | A | -2.0411 | |
| 91 | K | A | -3.0420 | |
| 92 | W | A | -2.0272 | |
| 93 | V | A | 0.0000 | |
| 94 | R | A | -3.8110 | |
| 95 | D | A | -3.6026 | |
| 96 | N | A | -2.9236 | |
| 97 | G | A | -2.2887 | |
| 98 | Y | A | -2.5975 | |
| 99 | E | A | -3.0860 | |
| 100 | L | A | -1.6456 | |
| 101 | S | A | -1.3611 | |
| 102 | G | A | -1.1535 | |
| 103 | E | A | -0.7418 | |
| 104 | A | A | 0.0000 | |
| 105 | Y | A | 0.0000 | |
| 106 | E | A | 0.0000 | |
| 107 | I | A | 0.4528 | |
| 108 | Y | A | 0.0621 | |
| 109 | L | A | 0.3119 | |
| 110 | D | A | -0.8552 | |
| 111 | A | A | -0.8296 | |
| 112 | P | A | -1.1081 | |
| 113 | A | A | -1.0358 | |
| 114 | E | A | -1.9891 | |
| 115 | T | A | -1.8823 | |
| 116 | P | A | -1.7248 | |
| 117 | P | A | -1.8873 | |
| 118 | D | A | -2.1949 | |
| 119 | Q | A | -1.9944 | |
| 120 | L | A | 0.0000 | |
| 121 | R | A | -0.5635 | |
| 122 | T | A | 0.0000 | |
| 123 | Q | A | 0.3325 | |
| 124 | V | A | 0.0000 | |
| 125 | V | A | 0.0000 | |
| 126 | L | A | 0.0000 | |
| 127 | M | A | 0.0000 | |
| 128 | L | A | 0.0000 | |
| 129 | K | A | -2.6563 | |
| 130 | N | A | -2.0631 | |
| 131 | A | A | -1.6607 | |
| 132 | G | A | -1.2662 | |
| 133 | P | A | -1.3206 | |
| 134 | E | A | -2.2287 | |
| 135 | T | A | -1.6618 | |
| 136 | E | A | -1.6265 | |
| 137 | T | A | -1.1482 | |
| 138 | L | A | -1.2757 | |
| 139 | E | A | -2.3729 | |
| 140 | S | A | -1.8606 | |
| 141 | Q | A | -1.8118 | |
| 142 | P | A | -0.9626 | |
| 143 | A | A | 0.0000 | |
| 144 | L | A | 1.2733 | |
| 145 | L | A | 0.0000 | |
| 146 | I | A | 0.1356 | |
| 147 | R | A | -1.9847 | |
| 148 | T | A | -1.8006 | |
| 149 | R | A | -2.0827 | |
| 150 | T | A | -0.7632 | |
| 151 | T | A | -0.7634 |