Project name: FMN21

Status: done

Started: 2026-07-09 14:43:53
Settings
Chain sequence(s) A: MLTPEERAAGRARGRVGFLIIGDGDGAGTLAQRFVAEVRGETGDPLAYVERIKERLRELAAANPERREEILSYLEPIFTLIGDPDLPPEVRAIYEEVLAEAGLELHTFEELTPENLVRLLRERGGFVTSVIDPEKAAKLRELIEELLARRDELPEGVVVLEGEAPGGLAGVEDLLGKVDEAMYAGKDVIGIVVG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:08)
Show buried residues

Minimal score value
-4.631
Maximal score value
0.7614
Average score
-1.2611
Total score value
-244.6484

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.6351
2 L A 0.0000
3 T A -0.8084
4 P A -1.3789
5 E A -2.3507
6 E A -1.5598
7 R A -1.5397
8 A A -1.4678
9 A A -1.1110
10 G A 0.0000
11 R A -1.9085
12 A A -1.4446
13 R A -2.1456
14 G A 0.0000
15 R A -1.8729
16 V A 0.0000
17 G A 0.0000
18 F A 0.0000
19 L A 0.0000
20 I A 0.0000
21 I A 0.0000
22 G A -0.5738
23 D A -1.5247
24 G A -1.5515
25 D A -2.3607
26 G A -1.1935
27 A A 0.0000
28 G A -0.6497
29 T A -0.4968
30 L A -0.5421
31 A A 0.0000
32 Q A 0.0000
33 R A -2.1204
34 F A 0.0000
35 V A 0.0000
36 A A 0.0000
37 E A -3.0669
38 V A 0.0000
39 R A -2.4518
40 G A -2.2705
41 E A -3.2032
42 T A -1.9911
43 G A -1.7664
44 D A -2.0835
45 P A -1.6907
46 L A -0.9665
47 A A -1.2936
48 Y A 0.0000
49 V A -1.4786
50 E A -3.3405
51 R A -3.8379
52 I A 0.0000
53 K A -3.6751
54 E A -4.6310
55 R A -3.7009
56 L A 0.0000
57 R A -3.8421
58 E A -3.4602
59 L A -2.1620
60 A A 0.0000
61 A A -1.6332
62 A A -1.2256
63 N A -1.9872
64 P A -2.1167
65 E A -2.9758
66 R A -2.8038
67 R A -3.2182
68 E A -3.0177
69 E A -2.2648
70 I A 0.0000
71 L A -1.7030
72 S A -1.1521
73 Y A -0.7811
74 L A -1.4418
75 E A -1.4733
76 P A -0.3401
77 I A 0.7614
78 F A 0.0000
79 T A 0.0564
80 L A 0.0000
81 I A 0.0000
82 G A 0.0000
83 D A -1.5390
84 P A -1.7619
85 D A -2.2714
86 L A 0.0000
87 P A -1.2216
88 P A -1.1409
89 E A -1.3299
90 V A 0.0000
91 R A -1.8474
92 A A -1.5910
93 I A 0.0000
94 Y A 0.0000
95 E A -2.8920
96 E A -3.0648
97 V A 0.0000
98 L A 0.0000
99 A A -2.0034
100 E A -2.5112
101 A A -1.5202
102 G A -1.0562
103 L A 0.0000
104 E A -1.0821
105 L A -0.9858
106 H A -1.1673
107 T A -1.5392
108 F A -1.7531
109 E A -2.7060
110 E A -2.6595
111 L A 0.0000
112 T A -1.6083
113 P A 0.0000
114 E A -2.1558
115 N A -1.7133
116 L A 0.0000
117 V A 0.0000
118 R A -2.2197
119 L A 0.0000
120 L A 0.0000
121 R A -3.2023
122 E A -3.0789
123 R A -2.1307
124 G A -1.8019
125 G A 0.0000
126 F A 0.0000
127 V A 0.0000
128 T A 0.0000
129 S A 0.1019
130 V A 0.0000
131 I A 0.6257
132 D A -0.9790
133 P A -1.2885
134 E A -2.3767
135 K A -1.7938
136 A A -1.3039
137 A A -1.8685
138 K A -2.6688
139 L A 0.0000
140 R A -3.0648
141 E A -3.5707
142 L A 0.0000
143 I A 0.0000
144 E A -3.5287
145 E A -2.9257
146 L A 0.0000
147 L A -2.0292
148 A A -1.8560
149 R A -2.6218
150 R A -2.9429
151 D A -3.4637
152 E A -3.5588
153 L A -2.4268
154 P A -1.9210
155 E A -2.3515
156 G A -1.1462
157 V A -1.1297
158 V A -0.3772
159 V A 0.0000
160 L A -0.7044
161 E A -1.6672
162 G A -2.1669
163 E A -2.5821
164 A A -1.7056
165 P A -0.8390
166 G A -1.1625
167 G A 0.0000
168 L A -1.0788
169 A A -1.3540
170 G A 0.0000
171 V A 0.0000
172 E A -2.5489
173 D A -2.8238
174 L A 0.0000
175 L A -1.3506
176 G A -1.6485
177 K A -2.0223
178 V A 0.0000
179 D A 0.0000
180 E A -1.7250
181 A A -1.0842
182 M A 0.0000
183 Y A -0.5838
184 A A -0.5150
185 G A -1.1604
186 K A -1.4412
187 D A -1.3450
188 V A 0.0000
189 I A 0.0000
190 G A 0.0000
191 I A 0.0000
192 V A 0.0000
193 V A -0.3544
194 G A -0.5686
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Laboratory of Theory of Biopolymers 2018