| Chain sequence(s) |
A: MLTPEERAAGRARGRVGFLIIGDGDGAGTLAQRFVAEVRGETGDPLAYVERIKERLRELAAANPERREEILSYLEPIFTLIGDPDLPPEVRAIYEEVLAEAGLELHTFEELTPENLVRLLRERGGFVTSVIDPEKAAKLRELIEELLARRDELPEGVVVLEGEAPGGLAGVEDLLGKVDEAMYAGKDVIGIVVG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:07)
[INFO] Main: Simulation completed successfully. (00:03:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.6351 | |
| 2 | L | A | 0.0000 | |
| 3 | T | A | -0.8084 | |
| 4 | P | A | -1.3789 | |
| 5 | E | A | -2.3507 | |
| 6 | E | A | -1.5598 | |
| 7 | R | A | -1.5397 | |
| 8 | A | A | -1.4678 | |
| 9 | A | A | -1.1110 | |
| 10 | G | A | 0.0000 | |
| 11 | R | A | -1.9085 | |
| 12 | A | A | -1.4446 | |
| 13 | R | A | -2.1456 | |
| 14 | G | A | 0.0000 | |
| 15 | R | A | -1.8729 | |
| 16 | V | A | 0.0000 | |
| 17 | G | A | 0.0000 | |
| 18 | F | A | 0.0000 | |
| 19 | L | A | 0.0000 | |
| 20 | I | A | 0.0000 | |
| 21 | I | A | 0.0000 | |
| 22 | G | A | -0.5738 | |
| 23 | D | A | -1.5247 | |
| 24 | G | A | -1.5515 | |
| 25 | D | A | -2.3607 | |
| 26 | G | A | -1.1935 | |
| 27 | A | A | 0.0000 | |
| 28 | G | A | -0.6497 | |
| 29 | T | A | -0.4968 | |
| 30 | L | A | -0.5421 | |
| 31 | A | A | 0.0000 | |
| 32 | Q | A | 0.0000 | |
| 33 | R | A | -2.1204 | |
| 34 | F | A | 0.0000 | |
| 35 | V | A | 0.0000 | |
| 36 | A | A | 0.0000 | |
| 37 | E | A | -3.0669 | |
| 38 | V | A | 0.0000 | |
| 39 | R | A | -2.4518 | |
| 40 | G | A | -2.2705 | |
| 41 | E | A | -3.2032 | |
| 42 | T | A | -1.9911 | |
| 43 | G | A | -1.7664 | |
| 44 | D | A | -2.0835 | |
| 45 | P | A | -1.6907 | |
| 46 | L | A | -0.9665 | |
| 47 | A | A | -1.2936 | |
| 48 | Y | A | 0.0000 | |
| 49 | V | A | -1.4786 | |
| 50 | E | A | -3.3405 | |
| 51 | R | A | -3.8379 | |
| 52 | I | A | 0.0000 | |
| 53 | K | A | -3.6751 | |
| 54 | E | A | -4.6310 | |
| 55 | R | A | -3.7009 | |
| 56 | L | A | 0.0000 | |
| 57 | R | A | -3.8421 | |
| 58 | E | A | -3.4602 | |
| 59 | L | A | -2.1620 | |
| 60 | A | A | 0.0000 | |
| 61 | A | A | -1.6332 | |
| 62 | A | A | -1.2256 | |
| 63 | N | A | -1.9872 | |
| 64 | P | A | -2.1167 | |
| 65 | E | A | -2.9758 | |
| 66 | R | A | -2.8038 | |
| 67 | R | A | -3.2182 | |
| 68 | E | A | -3.0177 | |
| 69 | E | A | -2.2648 | |
| 70 | I | A | 0.0000 | |
| 71 | L | A | -1.7030 | |
| 72 | S | A | -1.1521 | |
| 73 | Y | A | -0.7811 | |
| 74 | L | A | -1.4418 | |
| 75 | E | A | -1.4733 | |
| 76 | P | A | -0.3401 | |
| 77 | I | A | 0.7614 | |
| 78 | F | A | 0.0000 | |
| 79 | T | A | 0.0564 | |
| 80 | L | A | 0.0000 | |
| 81 | I | A | 0.0000 | |
| 82 | G | A | 0.0000 | |
| 83 | D | A | -1.5390 | |
| 84 | P | A | -1.7619 | |
| 85 | D | A | -2.2714 | |
| 86 | L | A | 0.0000 | |
| 87 | P | A | -1.2216 | |
| 88 | P | A | -1.1409 | |
| 89 | E | A | -1.3299 | |
| 90 | V | A | 0.0000 | |
| 91 | R | A | -1.8474 | |
| 92 | A | A | -1.5910 | |
| 93 | I | A | 0.0000 | |
| 94 | Y | A | 0.0000 | |
| 95 | E | A | -2.8920 | |
| 96 | E | A | -3.0648 | |
| 97 | V | A | 0.0000 | |
| 98 | L | A | 0.0000 | |
| 99 | A | A | -2.0034 | |
| 100 | E | A | -2.5112 | |
| 101 | A | A | -1.5202 | |
| 102 | G | A | -1.0562 | |
| 103 | L | A | 0.0000 | |
| 104 | E | A | -1.0821 | |
| 105 | L | A | -0.9858 | |
| 106 | H | A | -1.1673 | |
| 107 | T | A | -1.5392 | |
| 108 | F | A | -1.7531 | |
| 109 | E | A | -2.7060 | |
| 110 | E | A | -2.6595 | |
| 111 | L | A | 0.0000 | |
| 112 | T | A | -1.6083 | |
| 113 | P | A | 0.0000 | |
| 114 | E | A | -2.1558 | |
| 115 | N | A | -1.7133 | |
| 116 | L | A | 0.0000 | |
| 117 | V | A | 0.0000 | |
| 118 | R | A | -2.2197 | |
| 119 | L | A | 0.0000 | |
| 120 | L | A | 0.0000 | |
| 121 | R | A | -3.2023 | |
| 122 | E | A | -3.0789 | |
| 123 | R | A | -2.1307 | |
| 124 | G | A | -1.8019 | |
| 125 | G | A | 0.0000 | |
| 126 | F | A | 0.0000 | |
| 127 | V | A | 0.0000 | |
| 128 | T | A | 0.0000 | |
| 129 | S | A | 0.1019 | |
| 130 | V | A | 0.0000 | |
| 131 | I | A | 0.6257 | |
| 132 | D | A | -0.9790 | |
| 133 | P | A | -1.2885 | |
| 134 | E | A | -2.3767 | |
| 135 | K | A | -1.7938 | |
| 136 | A | A | -1.3039 | |
| 137 | A | A | -1.8685 | |
| 138 | K | A | -2.6688 | |
| 139 | L | A | 0.0000 | |
| 140 | R | A | -3.0648 | |
| 141 | E | A | -3.5707 | |
| 142 | L | A | 0.0000 | |
| 143 | I | A | 0.0000 | |
| 144 | E | A | -3.5287 | |
| 145 | E | A | -2.9257 | |
| 146 | L | A | 0.0000 | |
| 147 | L | A | -2.0292 | |
| 148 | A | A | -1.8560 | |
| 149 | R | A | -2.6218 | |
| 150 | R | A | -2.9429 | |
| 151 | D | A | -3.4637 | |
| 152 | E | A | -3.5588 | |
| 153 | L | A | -2.4268 | |
| 154 | P | A | -1.9210 | |
| 155 | E | A | -2.3515 | |
| 156 | G | A | -1.1462 | |
| 157 | V | A | -1.1297 | |
| 158 | V | A | -0.3772 | |
| 159 | V | A | 0.0000 | |
| 160 | L | A | -0.7044 | |
| 161 | E | A | -1.6672 | |
| 162 | G | A | -2.1669 | |
| 163 | E | A | -2.5821 | |
| 164 | A | A | -1.7056 | |
| 165 | P | A | -0.8390 | |
| 166 | G | A | -1.1625 | |
| 167 | G | A | 0.0000 | |
| 168 | L | A | -1.0788 | |
| 169 | A | A | -1.3540 | |
| 170 | G | A | 0.0000 | |
| 171 | V | A | 0.0000 | |
| 172 | E | A | -2.5489 | |
| 173 | D | A | -2.8238 | |
| 174 | L | A | 0.0000 | |
| 175 | L | A | -1.3506 | |
| 176 | G | A | -1.6485 | |
| 177 | K | A | -2.0223 | |
| 178 | V | A | 0.0000 | |
| 179 | D | A | 0.0000 | |
| 180 | E | A | -1.7250 | |
| 181 | A | A | -1.0842 | |
| 182 | M | A | 0.0000 | |
| 183 | Y | A | -0.5838 | |
| 184 | A | A | -0.5150 | |
| 185 | G | A | -1.1604 | |
| 186 | K | A | -1.4412 | |
| 187 | D | A | -1.3450 | |
| 188 | V | A | 0.0000 | |
| 189 | I | A | 0.0000 | |
| 190 | G | A | 0.0000 | |
| 191 | I | A | 0.0000 | |
| 192 | V | A | 0.0000 | |
| 193 | V | A | -0.3544 | |
| 194 | G | A | -0.5686 |