Project name: AAB-PP3129

Status: done

Started: 2026-03-31 14:36:37
Settings
Chain sequence(s) H: QVQLVESGGGVVQPGESLKISCAASGFTFSSYGMHWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSTYYYQESGYDYYFSPWGPGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQHIRSSLAWYQQKPGKAPKLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLQPEDFATYYCQHTYITPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-3.1639
Maximal score value
2.2969
Average score
-0.5853
Total score value
-135.7833

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 Q H -1.3275
1 V H -0.6695
2 Q H -0.8277
3 L H 0.0000
4 V H 1.3728
5 E H 0.0000
6 S H -0.1150
7 G H -0.7628
8 G H 0.1540
9 G H 0.9340
10 V H 1.5564
11 V H 0.0000
12 Q H -1.7870
13 P H -1.9126
14 G H -2.0626
15 E H -2.2269
16 S H -1.6140
17 L H -1.0046
18 K H -1.9324
19 I H 0.0000
20 S H -0.3082
21 C H 0.0000
22 A H 0.0270
23 A H -0.3832
24 S H -0.5670
25 G H -0.8736
26 F H -0.2954
27 T H -0.1690
28 F H 0.0000
29 S H -0.8252
30 S H -0.1802
31 Y H 0.1510
32 G H -0.0528
33 M H 0.0000
34 H H 0.0000
35 W H 0.0000
36 V H 0.0000
37 R H 0.0000
38 Q H -0.7208
39 A H -1.0360
40 P H -0.9783
41 G H -1.5066
42 K H -2.3850
43 G H -1.6222
44 L H 0.0000
45 E H -1.2227
46 W H 0.0000
47 V H 0.0000
48 S H 0.0000
49 A H 0.0000
50 I H 0.0000
51 S H -0.3164
52 G H -0.4958
53 S H -0.7243
54 G H -0.8365
55 G H -0.7462
56 S H -0.2845
57 T H 0.2683
58 Y H 0.6584
59 Y H -0.3193
60 A H -1.1405
61 D H -2.3320
62 S H -1.7119
63 V H 0.0000
64 K H -2.4218
65 G H -1.6982
66 R H -1.2535
67 F H 0.0000
68 T H -0.6644
69 I H 0.0000
70 S H -0.4661
71 R H -1.0945
72 D H -1.6518
73 N H -1.8038
74 S H -1.6320
75 K H -2.4351
76 N H -1.8560
77 T H -1.0007
78 L H 0.0000
79 Y H -0.4624
80 L H 0.0000
81 Q H -1.1191
82 M H 0.0000
83 N H -1.7232
84 S H -1.6552
85 L H 0.0000
86 R H -2.7701
87 A H -1.9100
88 E H -2.3125
89 D H 0.0000
90 T H -0.4229
91 A H 0.0000
92 V H 0.9104
93 Y H 0.0000
94 Y H 0.0000
95 C H 0.0000
96 A H 0.0000
97 R H -0.2037
98 S H 0.0000
99 T H 0.4980
100 Y H 1.5185
101 Y H 1.5870
102 Y H 0.9767
103 Q H -1.2183
104 E H -2.1465
105 S H -1.0216
106 G H -0.4198
107 Y H 1.5774
108 D H 1.3696
109 Y H 1.4432
110 Y H 0.6858
111 F H 0.0000
112 S H -0.2640
113 P H -0.4887
114 W H -0.3795
115 G H 0.0000
116 P H -0.3608
117 G H 0.1979
118 T H 0.7543
119 L H 1.7451
120 V H 0.0000
121 T H 0.3763
122 V H 0.0000
123 S H -0.6583
124 S H -0.5950
125 D L -1.9786
126 I L 0.0000
127 Q L -2.1795
128 M L 0.0000
129 T L -1.2806
130 Q L 0.0000
131 S L -0.7315
132 P L -0.5968
133 S L -0.9588
134 S L -1.1318
135 L L -0.6504
136 S L -0.7030
137 A L 0.0000
138 S L -0.1526
139 V L 0.7078
140 G L -0.7127
141 D L -1.6708
142 R L -2.3442
143 V L 0.0000
144 T L -0.6345
145 I L 0.0000
146 T L -0.9486
147 C L 0.0000
148 R L -3.0418
149 A L 0.0000
150 S L -2.2567
151 Q L -2.8565
152 H L -2.5508
153 I L 0.0000
154 R L -2.5804
155 S L -1.4415
156 S L -0.3820
157 L L 0.0000
158 A L 0.0000
159 W L 0.0000
160 Y L 0.0000
161 Q L -1.0097
162 Q L 0.0000
163 K L -2.1822
164 P L -1.4674
165 G L -1.6542
166 K L -2.5536
167 A L -1.5306
168 P L 0.0000
169 K L -2.0053
170 L L -0.7618
171 L L 0.0000
172 I L 0.0000
173 Y L -0.0317
174 G L -0.7615
175 A L 0.0000
176 S L -0.7584
177 S L -0.7870
178 R L -1.6108
179 A L -0.8472
180 T L -0.5831
181 G L -0.9173
182 I L 0.0000
183 P L -1.3867
184 D L -2.3071
185 R L -1.6227
186 F L 0.0000
187 S L -1.0282
188 G L -0.5737
189 S L -0.8419
190 G L -1.4528
191 S L -1.8427
192 G L -2.4361
193 T L -2.6667
194 D L -3.1639
195 F L 0.0000
196 T L -0.9111
197 L L 0.0000
198 T L -0.6136
199 I L 0.0000
200 S L -1.6853
201 S L -1.2950
202 L L 0.0000
203 Q L -0.7805
204 P L -0.6497
205 E L -1.8875
206 D L 0.0000
207 F L -0.5679
208 A L 0.0000
209 T L -1.2475
210 Y L 0.0000
211 Y L 0.0000
212 C L 0.0000
213 Q L 0.0000
214 H L 0.0000
215 T L 1.3247
216 Y L 1.7065
217 I L 2.2969
218 T L 0.9259
219 P L 0.1133
220 Y L 0.3022
221 T L -0.3791
222 F L -0.4547
223 G L 0.0000
224 Q L -1.5937
225 G L 0.0000
226 T L 0.0000
227 K L -2.1434
228 V L 0.0000
229 E L -0.9095
230 I L 0.9365
231 K L -0.7866
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Laboratory of Theory of Biopolymers 2018