| Chain sequence(s) |
A: IVIVKGH
C: IVIVKGH B: IVIVKGH E: IVIVKGH D: IVIVKGH G: IVIVKGH F: IVIVKGH I: IVIVKGH H: IVIVKGH K: IVIVKGH J: IVIVKGH L: IVIVKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:32)
[INFO] Main: Simulation completed successfully. (00:02:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 2.7417 | |
| 2 | V | A | 0.0000 | |
| 3 | I | A | 1.5949 | |
| 4 | V | A | 0.0000 | |
| 5 | K | A | -1.7065 | |
| 6 | G | A | -1.7029 | |
| 7 | H | A | -2.5006 | |
| 1 | I | B | 3.0835 | |
| 2 | V | B | 3.0383 | |
| 3 | I | B | 2.0521 | |
| 4 | V | B | 1.2996 | |
| 5 | K | B | -1.4054 | |
| 6 | G | B | -1.6273 | |
| 7 | H | B | -2.1932 | |
| 1 | I | C | 3.4887 | |
| 2 | V | C | 4.0716 | |
| 3 | I | C | 3.2719 | |
| 4 | V | C | 2.3471 | |
| 5 | K | C | 0.4245 | |
| 6 | G | C | -1.0951 | |
| 7 | H | C | -1.8227 | |
| 1 | I | D | 2.8517 | |
| 2 | V | D | 3.4685 | |
| 3 | I | D | 0.0000 | |
| 4 | V | D | 2.0225 | |
| 5 | K | D | 0.0000 | |
| 6 | G | D | -1.0923 | |
| 7 | H | D | -2.1625 | |
| 1 | I | E | 2.3759 | |
| 2 | V | E | 2.7629 | |
| 3 | I | E | 0.0000 | |
| 4 | V | E | 1.9232 | |
| 5 | K | E | 0.0000 | |
| 6 | G | E | -1.0648 | |
| 7 | H | E | -2.1413 | |
| 1 | I | F | 2.7629 | |
| 2 | V | F | 3.3116 | |
| 3 | I | F | 0.0000 | |
| 4 | V | F | 2.0870 | |
| 5 | K | F | 0.0000 | |
| 6 | G | F | -0.9577 | |
| 7 | H | F | -2.1500 | |
| 1 | I | G | 3.1744 | |
| 2 | V | G | 3.8102 | |
| 3 | I | G | 2.8628 | |
| 4 | V | G | 2.4071 | |
| 5 | K | G | 0.9532 | |
| 6 | G | G | -0.7516 | |
| 7 | H | G | -1.6542 | |
| 1 | I | H | 4.0657 | |
| 2 | V | H | 4.3912 | |
| 3 | I | H | 3.7061 | |
| 4 | V | H | 1.8182 | |
| 5 | K | H | -1.3549 | |
| 6 | G | H | -1.8495 | |
| 7 | H | H | -2.2051 | |
| 1 | I | I | 3.8262 | |
| 2 | V | I | 0.0000 | |
| 3 | I | I | 2.5512 | |
| 4 | V | I | 1.1724 | |
| 5 | K | I | -1.3932 | |
| 6 | G | I | -1.7614 | |
| 7 | H | I | -2.5205 | |
| 1 | I | J | 3.1640 | |
| 2 | V | J | 0.0000 | |
| 3 | I | J | 1.5272 | |
| 4 | V | J | 0.0000 | |
| 5 | K | J | -1.7486 | |
| 6 | G | J | -1.6780 | |
| 7 | H | J | -2.3844 | |
| 1 | I | K | 2.8319 | |
| 2 | V | K | 0.0000 | |
| 3 | I | K | 1.0537 | |
| 4 | V | K | 0.0000 | |
| 5 | K | K | -1.6665 | |
| 6 | G | K | -1.7790 | |
| 7 | H | K | -2.3817 | |
| 1 | I | L | 2.5492 | |
| 2 | V | L | 0.0000 | |
| 3 | I | L | 1.0483 | |
| 4 | V | L | 0.0000 | |
| 5 | K | L | -1.6582 | |
| 6 | G | L | -1.7746 | |
| 7 | H | L | -2.3885 |