| Chain sequence(s) |
A: VNYGNGVSCSKTKCSVNWGQAFQERYTAGINSFVSGVASGAGSIGRRP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:19)
[INFO] Main: Simulation completed successfully. (00:00:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.7578 | |
| 2 | N | A | 0.1496 | |
| 3 | Y | A | 1.0496 | |
| 4 | G | A | -0.3517 | |
| 5 | N | A | -1.0554 | |
| 6 | G | A | -0.2272 | |
| 7 | V | A | 1.4611 | |
| 8 | S | A | 0.3513 | |
| 9 | C | A | 0.0258 | |
| 10 | S | A | -0.9998 | |
| 11 | K | A | -2.1153 | |
| 12 | T | A | -1.5720 | |
| 13 | K | A | -1.9105 | |
| 14 | C | A | -0.5609 | |
| 15 | S | A | 0.1346 | |
| 16 | V | A | 0.9150 | |
| 17 | N | A | -0.2058 | |
| 18 | W | A | 0.5412 | |
| 19 | G | A | -0.6508 | |
| 20 | Q | A | -1.5876 | |
| 21 | A | A | -0.8841 | |
| 22 | F | A | -0.2002 | |
| 23 | Q | A | -1.7946 | |
| 24 | E | A | -2.8235 | |
| 25 | R | A | -2.3684 | |
| 26 | Y | A | -0.5045 | |
| 27 | T | A | -0.5534 | |
| 28 | A | A | -0.7605 | |
| 29 | G | A | 0.1197 | |
| 30 | I | A | 1.2304 | |
| 31 | N | A | 0.0037 | |
| 32 | S | A | 0.9124 | |
| 33 | F | A | 2.5285 | |
| 34 | V | A | 1.4665 | |
| 35 | S | A | 0.6526 | |
| 36 | G | A | 0.6844 | |
| 37 | V | A | 1.7404 | |
| 38 | A | A | 0.9016 | |
| 39 | S | A | -0.0579 | |
| 40 | G | A | -0.1918 | |
| 41 | A | A | 0.3842 | |
| 42 | G | A | 0.4339 | |
| 43 | S | A | 0.3455 | |
| 44 | I | A | 0.8514 | |
| 45 | G | A | -0.8883 | |
| 46 | R | A | -2.5409 | |
| 47 | R | A | -2.7158 | |
| 48 | P | A | -1.6739 |