Chain sequence(s) |
H: QVQLQQSGAELVRPGTSVKVSCKASGYDFNNDLIEWVKQRPGQGLEWIAVINPGSGRTNYNEKFKGKATLTADKSSSTVYMQLSSLTSDDSAVYFCAMIYYGPHSYAMDYWGQGTSVTVSS
L: DIVMTQSHKFMSTVVGDRVSITCKASLDVRTAVAWYQQKPGQSPKLLIYSASYRYTGVPDRFTGSGSGTDFTFNIRSVQAEDLAVYYCQQHYGIPWTFGGGTKLEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11) [INFO] Main: Simulation completed successfully. (00:01:12) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.5491 | |
2 | V | H | -1.3486 | |
3 | Q | H | -1.9714 | |
4 | L | H | 0.0000 | |
5 | Q | H | -1.9437 | |
6 | Q | H | -1.2996 | |
7 | S | H | -0.9607 | |
8 | G | H | -0.7089 | |
9 | A | H | -0.0103 | |
11 | E | H | 0.1404 | |
12 | L | H | 0.9488 | |
13 | V | H | -0.2608 | |
14 | R | H | -1.8326 | |
15 | P | H | -1.6464 | |
16 | G | H | -1.2178 | |
17 | T | H | -1.0054 | |
18 | S | H | -0.9911 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.1471 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.6620 | |
23 | C | H | 0.0000 | |
24 | K | H | -1.5723 | |
25 | A | H | 0.0000 | |
26 | S | H | -1.4466 | |
27 | G | H | -1.4147 | |
28 | Y | H | -1.3743 | |
29 | D | H | -2.2183 | |
30 | F | H | 0.0000 | |
35 | N | H | -1.9724 | |
36 | N | H | -1.3552 | |
37 | D | H | 0.0000 | |
38 | L | H | -0.0597 | |
39 | I | H | 0.0000 | |
40 | E | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | K | H | 0.0000 | |
44 | Q | H | -0.9181 | |
45 | R | H | -1.5779 | |
46 | P | H | -1.1251 | |
47 | G | H | -1.3827 | |
48 | Q | H | -1.9717 | |
49 | G | H | -1.2715 | |
50 | L | H | 0.0000 | |
51 | E | H | -1.0626 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | A | H | 0.0000 | |
55 | V | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | N | H | -1.2177 | |
58 | P | H | 0.0000 | |
59 | G | H | -1.6767 | |
62 | S | H | -1.3438 | |
63 | G | H | -1.8072 | |
64 | R | H | -2.3078 | |
65 | T | H | -1.3421 | |
66 | N | H | -1.3362 | |
67 | Y | H | -1.3348 | |
68 | N | H | -2.1075 | |
69 | E | H | -3.4867 | |
70 | K | H | -3.2252 | |
71 | F | H | 0.0000 | |
72 | K | H | -3.1560 | |
74 | G | H | -1.9768 | |
75 | K | H | -1.7284 | |
76 | A | H | 0.0000 | |
77 | T | H | -0.8298 | |
78 | L | H | 0.0000 | |
79 | T | H | -0.5425 | |
80 | A | H | -0.7902 | |
81 | D | H | -1.3833 | |
82 | K | H | -1.9557 | |
83 | S | H | -1.0481 | |
84 | S | H | -0.9105 | |
85 | S | H | -1.4015 | |
86 | T | H | 0.0000 | |
87 | V | H | 0.0000 | |
88 | Y | H | -0.2830 | |
89 | M | H | 0.0000 | |
90 | Q | H | -1.0446 | |
91 | L | H | 0.0000 | |
92 | S | H | -0.8156 | |
93 | S | H | -0.8957 | |
94 | L | H | 0.0000 | |
95 | T | H | -1.2304 | |
96 | S | H | -1.3536 | |
97 | D | H | -1.8193 | |
98 | D | H | 0.0000 | |
99 | S | H | -0.6145 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.0327 | |
102 | Y | H | 0.0000 | |
103 | F | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | M | H | 0.0000 | |
107 | I | H | 0.0000 | |
108 | Y | H | 1.3350 | |
109 | Y | H | 1.3426 | |
110 | G | H | 0.4484 | |
111 | P | H | -0.0392 | |
112A | H | H | -0.6393 | |
112 | S | H | 0.3861 | |
113 | Y | H | 1.2520 | |
114 | A | H | 0.0000 | |
115 | M | H | 0.0000 | |
116 | D | H | 0.0000 | |
117 | Y | H | 0.0173 | |
118 | W | H | -0.5869 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.8482 | |
121 | G | H | -0.9086 | |
122 | T | H | 0.0000 | |
123 | S | H | -0.1117 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.0643 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.6651 | |
128 | S | H | -0.8115 | |
1 | D | L | -1.2754 | |
2 | I | L | 0.0000 | |
3 | V | L | 1.1773 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.9130 | |
6 | Q | L | -0.9925 | |
7 | S | L | -1.1383 | |
8 | H | L | -1.2210 | |
9 | K | L | -1.4231 | |
10 | F | L | 0.4345 | |
11 | M | L | 0.0681 | |
12 | S | L | 0.0851 | |
13 | T | L | 0.0000 | |
14 | V | L | 0.6752 | |
15 | V | L | 1.1206 | |
16 | G | L | -0.6351 | |
17 | D | L | -1.5571 | |
18 | R | L | -2.6024 | |
19 | V | L | 0.0000 | |
20 | S | L | -0.6996 | |
21 | I | L | 0.0000 | |
22 | T | L | -1.0161 | |
23 | C | L | 0.0000 | |
24 | K | L | -2.1595 | |
25 | A | L | 0.0000 | |
26 | S | L | -0.0672 | |
27 | L | L | 0.0233 | |
28 | D | L | -2.0347 | |
29 | V | L | 0.0000 | |
36 | R | L | -2.4556 | |
37 | T | L | -1.4664 | |
38 | A | L | -0.6031 | |
39 | V | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | -0.9130 | |
45 | K | L | -1.3900 | |
46 | P | L | -0.9909 | |
47 | G | L | -1.4256 | |
48 | Q | L | -1.9992 | |
49 | S | L | -1.2574 | |
50 | P | L | 0.0000 | |
51 | K | L | -0.7738 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.0000 | |
56 | S | L | 0.0000 | |
57 | A | L | 0.0000 | |
65 | S | L | 0.0318 | |
66 | Y | L | 0.4271 | |
67 | R | L | -0.4673 | |
68 | Y | L | -0.1242 | |
69 | T | L | -0.2164 | |
70 | G | L | -0.7111 | |
71 | V | L | -0.7043 | |
72 | P | L | -1.2288 | |
74 | D | L | -2.3911 | |
75 | R | L | -2.1603 | |
76 | F | L | 0.0000 | |
77 | T | L | -0.8518 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.5432 | |
80 | G | L | -1.4384 | |
83 | S | L | -1.9786 | |
84 | G | L | -2.1360 | |
85 | T | L | -2.1223 | |
86 | D | L | -2.8845 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.8112 | |
89 | F | L | 0.0000 | |
90 | N | L | 0.0000 | |
91 | I | L | 0.0000 | |
92 | R | L | -3.2074 | |
93 | S | L | -1.8462 | |
94 | V | L | 0.0000 | |
95 | Q | L | -1.0591 | |
96 | A | L | -0.3466 | |
97 | E | L | -1.5607 | |
98 | D | L | 0.0000 | |
99 | L | L | -0.2768 | |
100 | A | L | 0.0000 | |
101 | V | L | -0.3067 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | H | L | 0.0000 | |
108 | Y | L | 0.2124 | |
109 | G | L | 0.3096 | |
114 | I | L | 0.3276 | |
115 | P | L | -0.6540 | |
116 | W | L | 0.0000 | |
117 | T | L | 0.0640 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -1.1496 | |
121 | G | L | 0.0000 | |
122 | T | L | 0.0000 | |
123 | K | L | -0.7248 | |
124 | L | L | 0.0000 | |
125 | E | L | 0.2011 | |
126 | I | L | 1.3503 | |
127 | K | L | -0.4850 |