| Chain sequence(s) |
A: YPMPDDMTMKPTPPPQYPLNLQGGGGGQSGDGFGFAVQGHQKVWTSDNGRHEIGLNGGYGQHLGGPYGNSEPSWKVGSTYTYRFPNF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:34)
[INFO] Main: Simulation completed successfully. (00:00:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 20 | Y | A | 1.4517 | |
| 21 | P | A | 0.5746 | |
| 22 | M | A | 0.4101 | |
| 23 | P | A | -0.8967 | |
| 24 | D | A | -2.2702 | |
| 25 | D | A | -2.1140 | |
| 26 | M | A | -0.3955 | |
| 27 | T | A | -0.3281 | |
| 28 | M | A | 0.0990 | |
| 29 | K | A | -1.4321 | |
| 30 | P | A | -0.9618 | |
| 31 | T | A | -0.7154 | |
| 32 | P | A | -1.0234 | |
| 33 | P | A | -0.7089 | |
| 34 | P | A | -0.7248 | |
| 35 | Q | A | -0.8539 | |
| 36 | Y | A | 0.6555 | |
| 37 | P | A | 0.3164 | |
| 38 | L | A | 0.1344 | |
| 39 | N | A | -0.9398 | |
| 40 | L | A | 0.2148 | |
| 41 | Q | A | -1.1611 | |
| 42 | G | A | -0.8742 | |
| 43 | G | A | -1.0699 | |
| 44 | G | A | -0.4619 | |
| 45 | G | A | -0.6427 | |
| 46 | G | A | -1.0146 | |
| 47 | Q | A | -1.8675 | |
| 48 | S | A | -1.4002 | |
| 49 | G | A | -1.6255 | |
| 50 | D | A | -1.9340 | |
| 51 | G | A | -0.9384 | |
| 52 | F | A | 0.2839 | |
| 53 | G | A | -0.0859 | |
| 54 | F | A | 0.4291 | |
| 55 | A | A | -0.1846 | |
| 56 | V | A | 0.0367 | |
| 57 | Q | A | -1.0624 | |
| 58 | G | A | -0.6405 | |
| 59 | H | A | -1.0473 | |
| 60 | Q | A | -0.8874 | |
| 61 | K | A | -0.9333 | |
| 62 | V | A | 0.7256 | |
| 63 | W | A | 0.7486 | |
| 64 | T | A | -0.4667 | |
| 65 | S | A | -1.4459 | |
| 66 | D | A | -2.6547 | |
| 67 | N | A | -2.7235 | |
| 68 | G | A | -1.9064 | |
| 69 | R | A | -1.5908 | |
| 70 | H | A | -0.6248 | |
| 71 | E | A | -0.0626 | |
| 72 | I | A | 1.0110 | |
| 73 | G | A | 0.0000 | |
| 74 | L | A | 0.8117 | |
| 75 | N | A | -0.4809 | |
| 76 | G | A | 0.0634 | |
| 77 | G | A | -0.3458 | |
| 78 | Y | A | 0.3437 | |
| 79 | G | A | -0.3703 | |
| 80 | Q | A | -0.4330 | |
| 81 | H | A | -0.7293 | |
| 82 | L | A | -0.3943 | |
| 83 | G | A | -0.6304 | |
| 84 | G | A | -1.0651 | |
| 85 | P | A | -0.4315 | |
| 86 | Y | A | 0.4488 | |
| 87 | G | A | -0.7983 | |
| 88 | N | A | -1.4901 | |
| 89 | S | A | -1.6634 | |
| 90 | E | A | -2.2277 | |
| 91 | P | A | -1.0543 | |
| 92 | S | A | -0.5709 | |
| 93 | W | A | 0.3896 | |
| 94 | K | A | -0.5343 | |
| 95 | V | A | 1.0153 | |
| 96 | G | A | 0.3405 | |
| 97 | S | A | 0.5965 | |
| 98 | T | A | 0.6895 | |
| 99 | Y | A | 1.5546 | |
| 100 | T | A | 0.7001 | |
| 101 | Y | A | 0.9989 | |
| 102 | R | A | -0.4409 | |
| 103 | F | A | 1.3130 | |
| 104 | P | A | 0.4205 | |
| 105 | N | A | -0.0036 | |
| 106 | F | A | 1.5263 |