| Chain sequence(s) |
B: LEKALEEAKKNAKTPVSKMKAIILEEELNREKEE
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:29)
[INFO] Main: Simulation completed successfully. (00:01:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | -1.3498 | |
| 2 | E | B | -2.9422 | |
| 3 | K | B | -3.4271 | |
| 4 | A | B | -2.7151 | |
| 5 | L | B | -3.1005 | |
| 6 | E | B | -4.6633 | |
| 7 | E | B | -4.3153 | |
| 8 | A | B | 0.0000 | |
| 9 | K | B | -4.6438 | |
| 10 | K | B | -4.3144 | |
| 11 | N | B | -3.5142 | |
| 12 | A | B | -3.0343 | |
| 13 | K | B | -2.5903 | |
| 14 | T | B | -0.9345 | |
| 15 | P | B | -0.2857 | |
| 16 | V | B | 0.7863 | |
| 17 | S | B | -1.1998 | |
| 18 | K | B | -1.6550 | |
| 19 | M | B | 0.4599 | |
| 20 | K | B | -0.6312 | |
| 21 | A | B | 0.0000 | |
| 22 | I | B | -0.0471 | |
| 23 | I | B | 0.2390 | |
| 24 | L | B | -1.3526 | |
| 25 | E | B | -2.6110 | |
| 26 | E | B | -3.1651 | |
| 27 | E | B | -3.2780 | |
| 28 | L | B | -3.2971 | |
| 29 | N | B | -4.3995 | |
| 30 | R | B | -5.6269 | |
| 31 | E | B | -5.3734 | |
| 32 | K | B | -5.1376 | |
| 33 | E | B | -4.9585 | |
| 34 | E | B | -4.3995 |