| Chain sequence(s) |
A: ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:18)
[INFO] Main: Simulation completed successfully. (00:03:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.4569 | |
| 2 | D | A | -1.0158 | |
| 3 | T | A | -0.5674 | |
| 4 | I | A | 0.0000 | |
| 5 | V | A | 0.0000 | |
| 6 | A | A | 0.0000 | |
| 7 | V | A | 0.0000 | |
| 8 | E | A | 0.0000 | |
| 9 | L | A | 0.0000 | |
| 10 | D | A | 0.0000 | |
| 11 | T | A | 0.0000 | |
| 12 | Y | A | -0.2412 | |
| 13 | P | A | -0.6004 | |
| 14 | N | A | -1.0969 | |
| 15 | T | A | -1.1624 | |
| 16 | D | A | -2.0181 | |
| 17 | I | A | 0.0000 | |
| 18 | G | A | -1.5085 | |
| 19 | D | A | 0.0000 | |
| 20 | P | A | -0.6332 | |
| 21 | S | A | -0.3183 | |
| 22 | Y | A | -0.2413 | |
| 23 | P | A | -0.6183 | |
| 24 | H | A | 0.0000 | |
| 25 | I | A | 0.0000 | |
| 26 | G | A | 0.0000 | |
| 27 | I | A | 0.0000 | |
| 28 | D | A | 0.0000 | |
| 29 | I | A | 0.0000 | |
| 30 | K | A | -1.7483 | |
| 31 | S | A | -1.7026 | |
| 32 | V | A | 0.0000 | |
| 33 | R | A | -2.0611 | |
| 34 | S | A | -1.6692 | |
| 35 | K | A | -2.1746 | |
| 36 | K | A | -2.0174 | |
| 37 | T | A | -1.3098 | |
| 38 | A | A | -1.0712 | |
| 39 | K | A | -1.8013 | |
| 40 | W | A | 0.0000 | |
| 41 | N | A | -2.0510 | |
| 42 | M | A | -1.3621 | |
| 43 | Q | A | -1.6630 | |
| 44 | N | A | -2.2639 | |
| 45 | G | A | -1.4643 | |
| 46 | K | A | -1.1840 | |
| 47 | V | A | 0.0643 | |
| 48 | G | A | 0.0000 | |
| 49 | T | A | 0.0991 | |
| 50 | A | A | 0.0000 | |
| 51 | H | A | -0.6432 | |
| 52 | I | A | 0.0000 | |
| 53 | I | A | -0.1761 | |
| 54 | Y | A | 0.0000 | |
| 55 | N | A | -0.9563 | |
| 56 | S | A | -0.2947 | |
| 57 | V | A | 0.6234 | |
| 58 | D | A | -2.1513 | |
| 59 | K | A | -2.6862 | |
| 60 | R | A | -2.7743 | |
| 61 | L | A | 0.0000 | |
| 62 | S | A | -0.6212 | |
| 63 | A | A | 0.0000 | |
| 64 | V | A | 0.4706 | |
| 65 | V | A | 0.0000 | |
| 66 | S | A | -0.8302 | |
| 67 | Y | A | 0.0000 | |
| 68 | P | A | -1.1504 | |
| 69 | N | A | -1.7616 | |
| 70 | A | A | -1.7969 | |
| 71 | D | A | -2.3174 | |
| 72 | S | A | -1.3712 | |
| 73 | A | A | -0.8464 | |
| 74 | T | A | -0.1599 | |
| 75 | V | A | 0.0000 | |
| 76 | S | A | -0.9246 | |
| 77 | Y | A | -1.7884 | |
| 78 | D | A | -3.0818 | |
| 79 | V | A | -2.2555 | |
| 80 | D | A | -2.1816 | |
| 81 | L | A | 0.0000 | |
| 82 | D | A | -2.4444 | |
| 83 | N | A | -2.1143 | |
| 84 | V | A | -1.2571 | |
| 85 | L | A | 0.0000 | |
| 86 | P | A | -0.8798 | |
| 87 | E | A | -1.4586 | |
| 88 | W | A | 0.0113 | |
| 89 | V | A | 0.0000 | |
| 90 | R | A | 0.0170 | |
| 91 | V | A | 0.0000 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | S | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | S | A | 0.0000 | |
| 97 | T | A | 0.0000 | |
| 98 | G | A | 0.2378 | |
| 99 | L | A | 1.4570 | |
| 100 | Y | A | 0.3290 | |
| 101 | K | A | -0.7319 | |
| 102 | E | A | 0.0000 | |
| 103 | T | A | 0.0000 | |
| 104 | N | A | 0.0000 | |
| 105 | T | A | 0.0000 | |
| 106 | I | A | 0.0000 | |
| 107 | L | A | -0.3516 | |
| 108 | S | A | -0.5096 | |
| 109 | W | A | 0.0000 | |
| 110 | S | A | -0.3173 | |
| 111 | F | A | 0.0000 | |
| 112 | T | A | -0.9078 | |
| 113 | S | A | 0.0000 | |
| 114 | K | A | -1.7058 | |
| 115 | L | A | 0.0000 | |
| 116 | K | A | -1.7683 | |
| 117 | S | A | -1.5865 | |
| 118 | N | A | -1.6105 | |
| 119 | S | A | -1.5710 | |
| 120 | T | A | -1.4963 | |
| 121 | H | A | -2.2003 | |
| 122 | E | A | -2.7755 | |
| 123 | T | A | -2.3023 | |
| 124 | N | A | -2.1198 | |
| 125 | A | A | -1.3080 | |
| 126 | L | A | -0.6718 | |
| 127 | H | A | -0.9442 | |
| 128 | F | A | 0.0000 | |
| 129 | M | A | 0.3503 | |
| 130 | F | A | 0.0000 | |
| 131 | N | A | -1.5658 | |
| 132 | Q | A | -2.0105 | |
| 133 | F | A | 0.0000 | |
| 134 | S | A | -2.4106 | |
| 135 | K | A | -3.1298 | |
| 136 | D | A | -3.2950 | |
| 137 | Q | A | -2.3610 | |
| 138 | K | A | -2.3481 | |
| 139 | D | A | -0.9818 | |
| 140 | L | A | 0.0000 | |
| 141 | I | A | 0.8692 | |
| 142 | L | A | 0.5744 | |
| 143 | Q | A | 0.0531 | |
| 144 | G | A | -0.5766 | |
| 145 | D | A | -0.6881 | |
| 146 | A | A | -0.2380 | |
| 147 | T | A | -0.8142 | |
| 148 | T | A | 0.0000 | |
| 149 | G | A | 0.0000 | |
| 150 | T | A | -1.5545 | |
| 151 | D | A | -2.2709 | |
| 152 | G | A | -1.9740 | |
| 153 | N | A | -1.4962 | |
| 154 | L | A | 0.0000 | |
| 155 | E | A | -0.5186 | |
| 156 | L | A | 0.0000 | |
| 157 | T | A | 0.0000 | |
| 158 | R | A | -1.1765 | |
| 159 | V | A | -0.7052 | |
| 160 | S | A | -0.8884 | |
| 161 | S | A | -0.9313 | |
| 162 | N | A | -1.4391 | |
| 163 | G | A | -1.0446 | |
| 164 | S | A | -1.0206 | |
| 165 | P | A | 0.0000 | |
| 166 | Q | A | -1.1074 | |
| 167 | G | A | -0.2957 | |
| 168 | S | A | -0.2188 | |
| 169 | S | A | 0.0000 | |
| 170 | V | A | -0.2697 | |
| 171 | G | A | 0.0000 | |
| 172 | R | A | 0.0000 | |
| 173 | A | A | 0.0000 | |
| 174 | L | A | 0.0000 | |
| 175 | F | A | 0.0000 | |
| 176 | Y | A | 1.0960 | |
| 177 | A | A | 0.6934 | |
| 178 | P | A | 0.1539 | |
| 179 | V | A | 0.0000 | |
| 180 | H | A | -0.5928 | |
| 181 | I | A | -0.6510 | |
| 182 | W | A | -0.6251 | |
| 183 | E | A | -0.7980 | |
| 184 | S | A | -0.4290 | |
| 185 | S | A | -0.6167 | |
| 186 | A | A | -0.3717 | |
| 187 | V | A | 1.3090 | |
| 188 | V | A | 0.6800 | |
| 189 | A | A | 0.0000 | |
| 190 | S | A | -0.6613 | |
| 191 | F | A | 0.0000 | |
| 192 | E | A | -1.8477 | |
| 193 | A | A | 0.0000 | |
| 194 | T | A | -0.3872 | |
| 195 | F | A | 0.0000 | |
| 196 | T | A | 0.0909 | |
| 197 | F | A | 0.0000 | |
| 198 | L | A | -0.0566 | |
| 199 | I | A | 0.0000 | |
| 200 | K | A | -1.6058 | |
| 201 | S | A | 0.0000 | |
| 202 | P | A | -1.4291 | |
| 203 | D | A | -1.9524 | |
| 204 | S | A | -1.3727 | |
| 205 | H | A | -1.4985 | |
| 206 | P | A | 0.0000 | |
| 207 | A | A | 0.0000 | |
| 208 | D | A | 0.0000 | |
| 209 | G | A | 0.0000 | |
| 210 | I | A | 0.0000 | |
| 211 | A | A | 0.0000 | |
| 212 | F | A | 0.0000 | |
| 213 | F | A | 0.0000 | |
| 214 | I | A | 0.0000 | |
| 215 | S | A | 0.0000 | |
| 216 | N | A | -0.6119 | |
| 217 | I | A | -0.0463 | |
| 218 | D | A | -1.5788 | |
| 219 | S | A | 0.0000 | |
| 220 | S | A | -0.5359 | |
| 221 | I | A | -0.0874 | |
| 222 | P | A | -0.4519 | |
| 223 | S | A | -0.6079 | |
| 224 | G | A | -0.7999 | |
| 225 | S | A | 0.0000 | |
| 226 | T | A | -0.3711 | |
| 227 | G | A | -0.4739 | |
| 228 | R | A | -1.4707 | |
| 229 | L | A | 0.0000 | |
| 230 | L | A | 0.0000 | |
| 231 | G | A | 0.0000 | |
| 232 | L | A | 0.0000 | |
| 233 | F | A | 0.0000 | |
| 234 | P | A | -1.2012 | |
| 235 | D | A | -2.0484 | |
| 236 | A | A | -1.9555 | |
| 237 | N | A | -2.0602 |