Project name: ad835078a250ec9

Status: done

Started: 2026-06-24 01:28:44
Settings
Chain sequence(s) A: ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTAHIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGTDGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIKSPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:19)
Show buried residues

Minimal score value
-3.295
Maximal score value
1.457
Average score
-0.6632
Total score value
-157.1723

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.4569
2 D A -1.0158
3 T A -0.5674
4 I A 0.0000
5 V A 0.0000
6 A A 0.0000
7 V A 0.0000
8 E A 0.0000
9 L A 0.0000
10 D A 0.0000
11 T A 0.0000
12 Y A -0.2412
13 P A -0.6004
14 N A -1.0969
15 T A -1.1624
16 D A -2.0181
17 I A 0.0000
18 G A -1.5085
19 D A 0.0000
20 P A -0.6332
21 S A -0.3183
22 Y A -0.2413
23 P A -0.6183
24 H A 0.0000
25 I A 0.0000
26 G A 0.0000
27 I A 0.0000
28 D A 0.0000
29 I A 0.0000
30 K A -1.7483
31 S A -1.7026
32 V A 0.0000
33 R A -2.0611
34 S A -1.6692
35 K A -2.1746
36 K A -2.0174
37 T A -1.3098
38 A A -1.0712
39 K A -1.8013
40 W A 0.0000
41 N A -2.0510
42 M A -1.3621
43 Q A -1.6630
44 N A -2.2639
45 G A -1.4643
46 K A -1.1840
47 V A 0.0643
48 G A 0.0000
49 T A 0.0991
50 A A 0.0000
51 H A -0.6432
52 I A 0.0000
53 I A -0.1761
54 Y A 0.0000
55 N A -0.9563
56 S A -0.2947
57 V A 0.6234
58 D A -2.1513
59 K A -2.6862
60 R A -2.7743
61 L A 0.0000
62 S A -0.6212
63 A A 0.0000
64 V A 0.4706
65 V A 0.0000
66 S A -0.8302
67 Y A 0.0000
68 P A -1.1504
69 N A -1.7616
70 A A -1.7969
71 D A -2.3174
72 S A -1.3712
73 A A -0.8464
74 T A -0.1599
75 V A 0.0000
76 S A -0.9246
77 Y A -1.7884
78 D A -3.0818
79 V A -2.2555
80 D A -2.1816
81 L A 0.0000
82 D A -2.4444
83 N A -2.1143
84 V A -1.2571
85 L A 0.0000
86 P A -0.8798
87 E A -1.4586
88 W A 0.0113
89 V A 0.0000
90 R A 0.0170
91 V A 0.0000
92 G A 0.0000
93 L A 0.0000
94 S A 0.0000
95 A A 0.0000
96 S A 0.0000
97 T A 0.0000
98 G A 0.2378
99 L A 1.4570
100 Y A 0.3290
101 K A -0.7319
102 E A 0.0000
103 T A 0.0000
104 N A 0.0000
105 T A 0.0000
106 I A 0.0000
107 L A -0.3516
108 S A -0.5096
109 W A 0.0000
110 S A -0.3173
111 F A 0.0000
112 T A -0.9078
113 S A 0.0000
114 K A -1.7058
115 L A 0.0000
116 K A -1.7683
117 S A -1.5865
118 N A -1.6105
119 S A -1.5710
120 T A -1.4963
121 H A -2.2003
122 E A -2.7755
123 T A -2.3023
124 N A -2.1198
125 A A -1.3080
126 L A -0.6718
127 H A -0.9442
128 F A 0.0000
129 M A 0.3503
130 F A 0.0000
131 N A -1.5658
132 Q A -2.0105
133 F A 0.0000
134 S A -2.4106
135 K A -3.1298
136 D A -3.2950
137 Q A -2.3610
138 K A -2.3481
139 D A -0.9818
140 L A 0.0000
141 I A 0.8692
142 L A 0.5744
143 Q A 0.0531
144 G A -0.5766
145 D A -0.6881
146 A A -0.2380
147 T A -0.8142
148 T A 0.0000
149 G A 0.0000
150 T A -1.5545
151 D A -2.2709
152 G A -1.9740
153 N A -1.4962
154 L A 0.0000
155 E A -0.5186
156 L A 0.0000
157 T A 0.0000
158 R A -1.1765
159 V A -0.7052
160 S A -0.8884
161 S A -0.9313
162 N A -1.4391
163 G A -1.0446
164 S A -1.0206
165 P A 0.0000
166 Q A -1.1074
167 G A -0.2957
168 S A -0.2188
169 S A 0.0000
170 V A -0.2697
171 G A 0.0000
172 R A 0.0000
173 A A 0.0000
174 L A 0.0000
175 F A 0.0000
176 Y A 1.0960
177 A A 0.6934
178 P A 0.1539
179 V A 0.0000
180 H A -0.5928
181 I A -0.6510
182 W A -0.6251
183 E A -0.7980
184 S A -0.4290
185 S A -0.6167
186 A A -0.3717
187 V A 1.3090
188 V A 0.6800
189 A A 0.0000
190 S A -0.6613
191 F A 0.0000
192 E A -1.8477
193 A A 0.0000
194 T A -0.3872
195 F A 0.0000
196 T A 0.0909
197 F A 0.0000
198 L A -0.0566
199 I A 0.0000
200 K A -1.6058
201 S A 0.0000
202 P A -1.4291
203 D A -1.9524
204 S A -1.3727
205 H A -1.4985
206 P A 0.0000
207 A A 0.0000
208 D A 0.0000
209 G A 0.0000
210 I A 0.0000
211 A A 0.0000
212 F A 0.0000
213 F A 0.0000
214 I A 0.0000
215 S A 0.0000
216 N A -0.6119
217 I A -0.0463
218 D A -1.5788
219 S A 0.0000
220 S A -0.5359
221 I A -0.0874
222 P A -0.4519
223 S A -0.6079
224 G A -0.7999
225 S A 0.0000
226 T A -0.3711
227 G A -0.4739
228 R A -1.4707
229 L A 0.0000
230 L A 0.0000
231 G A 0.0000
232 L A 0.0000
233 F A 0.0000
234 P A -1.2012
235 D A -2.0484
236 A A -1.9555
237 N A -2.0602
Download PDB file
View in 3Dmol
Play the video

Laboratory of Theory of Biopolymers 2018